Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Copb1Q9JIF7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.04■□□□□ 0.64
Copb1Q9JIF7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Copb1Q9JIF7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Copb1Q9JIF7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Copb1Q9JIF7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Copb1Q9JIF7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Copb1Q9JIF7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Copb1Q9JIF7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.03■□□□□ 0.64
Copb1Q9JIF7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Copb1Q9JIF7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.03■□□□□ 0.64
Copb1Q9JIF7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Copb1Q9JIF7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Copb1Q9JIF7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Copb1Q9JIF7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Copb1Q9JIF7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Copb1Q9JIF7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Copb1Q9JIF7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Copb1Q9JIF7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Copb1Q9JIF7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Copb1Q9JIF7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Copb1Q9JIF7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Copb1Q9JIF7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Copb1Q9JIF7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Copb1Q9JIF7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Copb1Q9JIF7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Copb1Q9JIF7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Copb1Q9JIF7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Copb1Q9JIF7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Copb1Q9JIF7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.02■□□□□ 0.64
Copb1Q9JIF7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Copb1Q9JIF7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.02■□□□□ 0.63
Copb1Q9JIF7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Copb1Q9JIF7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Copb1Q9JIF7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Copb1Q9JIF7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Copb1Q9JIF7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Copb1Q9JIF7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Copb1Q9JIF7 Gm11643-201ENSMUST00000119578 864 ntBASIC19■□□□□ 0.63
Copb1Q9JIF7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19■□□□□ 0.63
Copb1Q9JIF7 Mir6349-201ENSMUST00000184059 97 ntBASIC19■□□□□ 0.63
Copb1Q9JIF7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19■□□□□ 0.63
Copb1Q9JIF7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19■□□□□ 0.63
Copb1Q9JIF7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Copb1Q9JIF7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Copb1Q9JIF7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Copb1Q9JIF7 Gm16401-202ENSMUST00000197463 2074 ntBASIC19■□□□□ 0.63
Copb1Q9JIF7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19■□□□□ 0.63
Copb1Q9JIF7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19■□□□□ 0.63
Copb1Q9JIF7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Copb1Q9JIF7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Copb1Q9JIF7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Copb1Q9JIF7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Copb1Q9JIF7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.99■□□□□ 0.63
Copb1Q9JIF7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Copb1Q9JIF7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Copb1Q9JIF7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Copb1Q9JIF7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Copb1Q9JIF7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Copb1Q9JIF7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Copb1Q9JIF7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Copb1Q9JIF7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Copb1Q9JIF7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.99■□□□□ 0.63
Copb1Q9JIF7 Gm5408-201ENSMUST00000197998 747 ntBASIC18.99■□□□□ 0.63
Copb1Q9JIF7 Gm4968-201ENSMUST00000071458 858 ntBASIC18.99■□□□□ 0.63
Copb1Q9JIF7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Copb1Q9JIF7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Copb1Q9JIF7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Copb1Q9JIF7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Copb1Q9JIF7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Copb1Q9JIF7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Copb1Q9JIF7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Copb1Q9JIF7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Copb1Q9JIF7 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.98■□□□□ 0.63
Copb1Q9JIF7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.98■□□□□ 0.63
Copb1Q9JIF7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Copb1Q9JIF7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Copb1Q9JIF7 Gm37179-201ENSMUST00000194862 823 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms