Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.23■□□□□ 0.19
Trim39Q9ESN2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Trim39Q9ESN2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim39Q9ESN2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim39Q9ESN2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim39Q9ESN2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim39Q9ESN2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim39Q9ESN2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim39Q9ESN2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim39Q9ESN2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim39Q9ESN2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.23■□□□□ 0.19
Trim39Q9ESN2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim39Q9ESN2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim39Q9ESN2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim39Q9ESN2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim39Q9ESN2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim39Q9ESN2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim39Q9ESN2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim39Q9ESN2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.22■□□□□ 0.19
Trim39Q9ESN2 Rab3c-203ENSMUST00000224180 967 ntBASIC16.22■□□□□ 0.19
Trim39Q9ESN2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim39Q9ESN2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim39Q9ESN2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim39Q9ESN2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trim39Q9ESN2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim39Q9ESN2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim39Q9ESN2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim39Q9ESN2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Trim39Q9ESN2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim39Q9ESN2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim39Q9ESN2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim39Q9ESN2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Trim39Q9ESN2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim39Q9ESN2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.21■□□□□ 0.19
Trim39Q9ESN2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trim39Q9ESN2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim39Q9ESN2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim39Q9ESN2 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.21■□□□□ 0.19
Trim39Q9ESN2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trim39Q9ESN2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim39Q9ESN2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Tgds-204ENSMUST00000228543 1594 ntBASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.2■□□□□ 0.18
Trim39Q9ESN2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim39Q9ESN2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim39Q9ESN2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim39Q9ESN2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim39Q9ESN2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trim39Q9ESN2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim39Q9ESN2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim39Q9ESN2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim39Q9ESN2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim39Q9ESN2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim39Q9ESN2 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.19■□□□□ 0.18
Trim39Q9ESN2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim39Q9ESN2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim39Q9ESN2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim39Q9ESN2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim39Q9ESN2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim39Q9ESN2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim39Q9ESN2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim39Q9ESN2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim39Q9ESN2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim39Q9ESN2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim39Q9ESN2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim39Q9ESN2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim39Q9ESN2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim39Q9ESN2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim39Q9ESN2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim39Q9ESN2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim39Q9ESN2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim39Q9ESN2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.18■□□□□ 0.18
Trim39Q9ESN2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim39Q9ESN2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim39Q9ESN2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim39Q9ESN2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Trim39Q9ESN2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms