Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 Gm9987-201ENSMUST00000069768 567 ntBASIC16.26■□□□□ 0.19
Rtp4Q9ER80 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.26■□□□□ 0.19
Rtp4Q9ER80 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Rtp4Q9ER80 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
Rtp4Q9ER80 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtp4Q9ER80 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtp4Q9ER80 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtp4Q9ER80 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtp4Q9ER80 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.25■□□□□ 0.19
Rtp4Q9ER80 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtp4Q9ER80 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rtp4Q9ER80 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rtp4Q9ER80 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtp4Q9ER80 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtp4Q9ER80 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtp4Q9ER80 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Rtp4Q9ER80 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtp4Q9ER80 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rtp4Q9ER80 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Mir6349-201ENSMUST00000184059 97 ntBASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Gm43799-201ENSMUST00000201845 579 ntBASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rtp4Q9ER80 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtp4Q9ER80 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtp4Q9ER80 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtp4Q9ER80 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtp4Q9ER80 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtp4Q9ER80 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rtp4Q9ER80 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtp4Q9ER80 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rtp4Q9ER80 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtp4Q9ER80 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtp4Q9ER80 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtp4Q9ER80 Gm12382-201ENSMUST00000122005 922 ntBASIC16.22■□□□□ 0.19
Rtp4Q9ER80 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms