Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a3bpQ9EQG9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.91■□□□□ 0.78
Col4a3bpQ9EQG9 Mir6349-201ENSMUST00000184059 97 ntBASIC19.91■□□□□ 0.78
Col4a3bpQ9EQG9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Col4a3bpQ9EQG9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.91■□□□□ 0.78
Col4a3bpQ9EQG9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a3bpQ9EQG9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a3bpQ9EQG9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Col4a3bpQ9EQG9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.9■□□□□ 0.78
Col4a3bpQ9EQG9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Col4a3bpQ9EQG9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Col4a3bpQ9EQG9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Col4a3bpQ9EQG9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Col4a3bpQ9EQG9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a3bpQ9EQG9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a3bpQ9EQG9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.9■□□□□ 0.78
Col4a3bpQ9EQG9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a3bpQ9EQG9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a3bpQ9EQG9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a3bpQ9EQG9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Col4a3bpQ9EQG9 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.9■□□□□ 0.78
Col4a3bpQ9EQG9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a3bpQ9EQG9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a3bpQ9EQG9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a3bpQ9EQG9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a3bpQ9EQG9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a3bpQ9EQG9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.78
Col4a3bpQ9EQG9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.89■□□□□ 0.77
Col4a3bpQ9EQG9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a3bpQ9EQG9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Col4a3bpQ9EQG9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a3bpQ9EQG9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a3bpQ9EQG9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a3bpQ9EQG9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a3bpQ9EQG9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Col4a3bpQ9EQG9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Col4a3bpQ9EQG9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a3bpQ9EQG9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a3bpQ9EQG9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a3bpQ9EQG9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a3bpQ9EQG9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.88■□□□□ 0.77
Col4a3bpQ9EQG9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a3bpQ9EQG9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a3bpQ9EQG9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a3bpQ9EQG9 Gm11643-201ENSMUST00000119578 864 ntBASIC19.88■□□□□ 0.77
Col4a3bpQ9EQG9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Col4a3bpQ9EQG9 Gm10138-203ENSMUST00000206952 366 ntBASIC19.88■□□□□ 0.77
Col4a3bpQ9EQG9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a3bpQ9EQG9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a3bpQ9EQG9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a3bpQ9EQG9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Col4a3bpQ9EQG9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a3bpQ9EQG9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a3bpQ9EQG9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Col4a3bpQ9EQG9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a3bpQ9EQG9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a3bpQ9EQG9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a3bpQ9EQG9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.87■□□□□ 0.77
Col4a3bpQ9EQG9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Col4a3bpQ9EQG9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a3bpQ9EQG9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a3bpQ9EQG9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.87■□□□□ 0.77
Col4a3bpQ9EQG9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.87■□□□□ 0.77
Col4a3bpQ9EQG9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a3bpQ9EQG9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a3bpQ9EQG9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a3bpQ9EQG9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.87■□□□□ 0.77
Col4a3bpQ9EQG9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a3bpQ9EQG9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Col4a3bpQ9EQG9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a3bpQ9EQG9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col4a3bpQ9EQG9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a3bpQ9EQG9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a3bpQ9EQG9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a3bpQ9EQG9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a3bpQ9EQG9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Col4a3bpQ9EQG9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a3bpQ9EQG9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a3bpQ9EQG9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Col4a3bpQ9EQG9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.86■□□□□ 0.77
Col4a3bpQ9EQG9 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.86■□□□□ 0.77
Col4a3bpQ9EQG9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Col4a3bpQ9EQG9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a3bpQ9EQG9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a3bpQ9EQG9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a3bpQ9EQG9 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.86■□□□□ 0.77
Col4a3bpQ9EQG9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col4a3bpQ9EQG9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a3bpQ9EQG9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a3bpQ9EQG9 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.85■□□□□ 0.77
Col4a3bpQ9EQG9 Gm10698-201ENSMUST00000182663 604 ntBASIC19.85■□□□□ 0.77
Col4a3bpQ9EQG9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a3bpQ9EQG9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a3bpQ9EQG9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col4a3bpQ9EQG9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Col4a3bpQ9EQG9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a3bpQ9EQG9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a3bpQ9EQG9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Col4a3bpQ9EQG9 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.84■□□□□ 0.77
Col4a3bpQ9EQG9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms