Protein–RNA interactions for Protein: Q9EPS9

Vmn1r56, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r56Q9EPS9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vmn1r56Q9EPS9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vmn1r56Q9EPS9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vmn1r56Q9EPS9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vmn1r56Q9EPS9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Vmn1r56Q9EPS9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vmn1r56Q9EPS9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r56Q9EPS9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r56Q9EPS9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r56Q9EPS9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r56Q9EPS9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r56Q9EPS9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r56Q9EPS9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r56Q9EPS9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Vmn1r56Q9EPS9 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.54■□□□□ 0.08
Vmn1r56Q9EPS9 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.54■□□□□ 0.08
Vmn1r56Q9EPS9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r56Q9EPS9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r56Q9EPS9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Vmn1r56Q9EPS9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r56Q9EPS9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r56Q9EPS9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r56Q9EPS9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r56Q9EPS9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vmn1r56Q9EPS9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.54■□□□□ 0.08
Vmn1r56Q9EPS9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r56Q9EPS9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Vmn1r56Q9EPS9 Flg-201ENSMUST00000050758 1488 ntBASIC15.53■□□□□ 0.08
Vmn1r56Q9EPS9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r56Q9EPS9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r56Q9EPS9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r56Q9EPS9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r56Q9EPS9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Vmn1r56Q9EPS9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r56Q9EPS9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r56Q9EPS9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r56Q9EPS9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r56Q9EPS9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r56Q9EPS9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r56Q9EPS9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Vmn1r56Q9EPS9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r56Q9EPS9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r56Q9EPS9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vmn1r56Q9EPS9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r56Q9EPS9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r56Q9EPS9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.52■□□□□ 0.08
Vmn1r56Q9EPS9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r56Q9EPS9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r56Q9EPS9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r56Q9EPS9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r56Q9EPS9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r56Q9EPS9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r56Q9EPS9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r56Q9EPS9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r56Q9EPS9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.52■□□□□ 0.08
Vmn1r56Q9EPS9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r56Q9EPS9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.52■□□□□ 0.08
Vmn1r56Q9EPS9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r56Q9EPS9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.52■□□□□ 0.08
Vmn1r56Q9EPS9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r56Q9EPS9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r56Q9EPS9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vmn1r56Q9EPS9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Vmn1r56Q9EPS9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Vmn1r56Q9EPS9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vmn1r56Q9EPS9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Vmn1r56Q9EPS9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Vmn1r56Q9EPS9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Vmn1r56Q9EPS9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vmn1r56Q9EPS9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms