Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Chmp2aQ9DB34 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp2aQ9DB34 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp2aQ9DB34 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.13■□□□□ 0.49
Chmp2aQ9DB34 Gm10517-202ENSMUST00000192970 758 ntBASIC18.13■□□□□ 0.49
Chmp2aQ9DB34 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp2aQ9DB34 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Chmp2aQ9DB34 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp2aQ9DB34 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp2aQ9DB34 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp2aQ9DB34 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp2aQ9DB34 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp2aQ9DB34 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Chmp2aQ9DB34 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp2aQ9DB34 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp2aQ9DB34 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp2aQ9DB34 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Chmp2aQ9DB34 Gm715-201ENSMUST00000117865 831 ntBASIC18.12■□□□□ 0.49
Chmp2aQ9DB34 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp2aQ9DB34 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Chmp2aQ9DB34 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2aQ9DB34 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2aQ9DB34 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2aQ9DB34 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2aQ9DB34 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Chmp2aQ9DB34 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2aQ9DB34 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2aQ9DB34 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2aQ9DB34 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2aQ9DB34 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2aQ9DB34 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2aQ9DB34 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2aQ9DB34 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp2aQ9DB34 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
Chmp2aQ9DB34 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 Gm10252-201ENSMUST00000209541 832 ntBASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.1■□□□□ 0.49
Chmp2aQ9DB34 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp2aQ9DB34 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.08■□□□□ 0.49
Chmp2aQ9DB34 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Chmp2aQ9DB34 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Chmp2aQ9DB34 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.08■□□□□ 0.49
Chmp2aQ9DB34 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.08■□□□□ 0.48
Chmp2aQ9DB34 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp2aQ9DB34 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp2aQ9DB34 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.08■□□□□ 0.48
Chmp2aQ9DB34 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp2aQ9DB34 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.08■□□□□ 0.48
Chmp2aQ9DB34 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.08■□□□□ 0.48
Chmp2aQ9DB34 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.08■□□□□ 0.48
Chmp2aQ9DB34 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Chmp2aQ9DB34 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp2aQ9DB34 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp2aQ9DB34 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp2aQ9DB34 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Chmp2aQ9DB34 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.08■□□□□ 0.48
Chmp2aQ9DB34 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp2aQ9DB34 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms