Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpap3Q9D706 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rpap3Q9D706 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rpap3Q9D706 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.14■□□□□ 0.65
Rpap3Q9D706 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpap3Q9D706 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.13■□□□□ 0.65
Rpap3Q9D706 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpap3Q9D706 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rpap3Q9D706 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpap3Q9D706 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Rpap3Q9D706 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpap3Q9D706 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rpap3Q9D706 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Rpap3Q9D706 Gm7213-201ENSMUST00000215977 950 ntBASIC19.13■□□□□ 0.65
Rpap3Q9D706 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpap3Q9D706 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rpap3Q9D706 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpap3Q9D706 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.13■□□□□ 0.65
Rpap3Q9D706 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpap3Q9D706 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpap3Q9D706 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rpap3Q9D706 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpap3Q9D706 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rpap3Q9D706 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rpap3Q9D706 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpap3Q9D706 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rpap3Q9D706 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpap3Q9D706 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpap3Q9D706 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rpap3Q9D706 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.12■□□□□ 0.65
Rpap3Q9D706 Gm27389-201ENSMUST00000183622 195 ntBASIC19.12■□□□□ 0.65
Rpap3Q9D706 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.12■□□□□ 0.65
Rpap3Q9D706 Gm21559-201ENSMUST00000220638 855 ntBASIC19.12■□□□□ 0.65
Rpap3Q9D706 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpap3Q9D706 Gm8587-201ENSMUST00000076538 843 ntBASIC19.12■□□□□ 0.65
Rpap3Q9D706 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpap3Q9D706 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpap3Q9D706 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Rpap3Q9D706 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpap3Q9D706 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.11■□□□□ 0.65
Rpap3Q9D706 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rpap3Q9D706 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.11■□□□□ 0.65
Rpap3Q9D706 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rpap3Q9D706 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.11■□□□□ 0.65
Rpap3Q9D706 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpap3Q9D706 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Rpap3Q9D706 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpap3Q9D706 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpap3Q9D706 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Rpap3Q9D706 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rpap3Q9D706 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rpap3Q9D706 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpap3Q9D706 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpap3Q9D706 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Rpap3Q9D706 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Rpap3Q9D706 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rpap3Q9D706 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.1■□□□□ 0.65
Rpap3Q9D706 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.1■□□□□ 0.65
Rpap3Q9D706 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Rpap3Q9D706 Gm6345-202ENSMUST00000180900 204 ntBASIC19.1■□□□□ 0.65
Rpap3Q9D706 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Rpap3Q9D706 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Rpap3Q9D706 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpap3Q9D706 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Rpap3Q9D706 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpap3Q9D706 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.1■□□□□ 0.65
Rpap3Q9D706 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rpap3Q9D706 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpap3Q9D706 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpap3Q9D706 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rpap3Q9D706 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rpap3Q9D706 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rpap3Q9D706 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Rpap3Q9D706 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpap3Q9D706 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.09■□□□□ 0.65
Rpap3Q9D706 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpap3Q9D706 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpap3Q9D706 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpap3Q9D706 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpap3Q9D706 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpap3Q9D706 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.09■□□□□ 0.65
Rpap3Q9D706 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpap3Q9D706 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rpap3Q9D706 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rpap3Q9D706 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rpap3Q9D706 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Rpap3Q9D706 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rpap3Q9D706 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpap3Q9D706 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpap3Q9D706 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.08■□□□□ 0.64
Rpap3Q9D706 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.08■□□□□ 0.64
Rpap3Q9D706 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpap3Q9D706 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpap3Q9D706 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rpap3Q9D706 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap3Q9D706 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap3Q9D706 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Rpap3Q9D706 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap3Q9D706 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rpap3Q9D706 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms