Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc7Q9D541 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Ccdc7Q9D541 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc7Q9D541 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc7Q9D541 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc7Q9D541 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc7Q9D541 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc7Q9D541 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc7Q9D541 Gm37292-201ENSMUST00000192062 758 ntBASIC20.31■□□□□ 0.84
Ccdc7Q9D541 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc7Q9D541 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc7Q9D541 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc7Q9D541 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc7Q9D541 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc7Q9D541 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc7Q9D541 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc7Q9D541 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.3■□□□□ 0.84
Ccdc7Q9D541 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc7Q9D541 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc7Q9D541 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.3■□□□□ 0.84
Ccdc7Q9D541 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.3■□□□□ 0.84
Ccdc7Q9D541 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc7Q9D541 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc7Q9D541 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc7Q9D541 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc7Q9D541 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc7Q9D541 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc7Q9D541 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc7Q9D541 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Ccdc7Q9D541 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc7Q9D541 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc7Q9D541 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Ccdc7Q9D541 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc7Q9D541 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc7Q9D541 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Ccdc7Q9D541 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.29■□□□□ 0.84
Ccdc7Q9D541 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc7Q9D541 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc7Q9D541 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.29■□□□□ 0.84
Ccdc7Q9D541 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ccdc7Q9D541 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.29■□□□□ 0.84
Ccdc7Q9D541 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc7Q9D541 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ccdc7Q9D541 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.28■□□□□ 0.84
Ccdc7Q9D541 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.28■□□□□ 0.84
Ccdc7Q9D541 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.28■□□□□ 0.84
Ccdc7Q9D541 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc7Q9D541 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc7Q9D541 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc7Q9D541 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.28■□□□□ 0.84
Ccdc7Q9D541 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc7Q9D541 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc7Q9D541 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ccdc7Q9D541 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ccdc7Q9D541 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc7Q9D541 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc7Q9D541 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc7Q9D541 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc7Q9D541 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.27■□□□□ 0.84
Ccdc7Q9D541 Gm4974-201ENSMUST00000209974 875 ntBASIC20.27■□□□□ 0.84
Ccdc7Q9D541 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc7Q9D541 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc7Q9D541 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc7Q9D541 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc7Q9D541 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.27■□□□□ 0.83
Ccdc7Q9D541 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc7Q9D541 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ccdc7Q9D541 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc7Q9D541 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc7Q9D541 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc7Q9D541 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc7Q9D541 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc7Q9D541 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc7Q9D541 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc7Q9D541 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc7Q9D541 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc7Q9D541 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccdc7Q9D541 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Ccdc7Q9D541 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc7Q9D541 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.26■□□□□ 0.83
Ccdc7Q9D541 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc7Q9D541 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc7Q9D541 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc7Q9D541 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc7Q9D541 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc7Q9D541 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc7Q9D541 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ccdc7Q9D541 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc7Q9D541 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc7Q9D541 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.25■□□□□ 0.83
Ccdc7Q9D541 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Ccdc7Q9D541 Gm12441-201ENSMUST00000121806 588 ntBASIC20.25■□□□□ 0.83
Ccdc7Q9D541 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc7Q9D541 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.25■□□□□ 0.83
Ccdc7Q9D541 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.25■□□□□ 0.83
Ccdc7Q9D541 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc7Q9D541 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Ccdc7Q9D541 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc7Q9D541 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc7Q9D541 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms