Protein–RNA interactions for Protein: Q9D4V4

Taf1d, TATA box-binding protein-associated factor RNA polymerase I subunit D, mousemouse

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1dQ9D4V4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Taf1dQ9D4V4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.81■□□□□ 0.92
Taf1dQ9D4V4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Taf1dQ9D4V4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Taf1dQ9D4V4 Gm23935-201ENSMUST00000102303 57 ntBASIC20.8■□□□□ 0.92
Taf1dQ9D4V4 Gm24270-201ENSMUST00000102326 57 ntBASIC20.8■□□□□ 0.92
Taf1dQ9D4V4 Gm24245-201ENSMUST00000157318 57 ntBASIC20.8■□□□□ 0.92
Taf1dQ9D4V4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.8■□□□□ 0.92
Taf1dQ9D4V4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Taf1dQ9D4V4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Taf1dQ9D4V4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Taf1dQ9D4V4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Taf1dQ9D4V4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Taf1dQ9D4V4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Taf1dQ9D4V4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Taf1dQ9D4V4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Taf1dQ9D4V4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Taf1dQ9D4V4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Taf1dQ9D4V4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.8■□□□□ 0.92
Taf1dQ9D4V4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Taf1dQ9D4V4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Taf1dQ9D4V4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Taf1dQ9D4V4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Taf1dQ9D4V4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Taf1dQ9D4V4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Taf1dQ9D4V4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Taf1dQ9D4V4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Taf1dQ9D4V4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
Taf1dQ9D4V4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Taf1dQ9D4V4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Taf1dQ9D4V4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.79■□□□□ 0.92
Taf1dQ9D4V4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Taf1dQ9D4V4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Taf1dQ9D4V4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Taf1dQ9D4V4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Taf1dQ9D4V4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Taf1dQ9D4V4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Taf1dQ9D4V4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Taf1dQ9D4V4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Taf1dQ9D4V4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Taf1dQ9D4V4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Taf1dQ9D4V4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Taf1dQ9D4V4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Taf1dQ9D4V4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Taf1dQ9D4V4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Taf1dQ9D4V4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.78■□□□□ 0.92
Taf1dQ9D4V4 Gm15467-201ENSMUST00000120582 445 ntBASIC20.78■□□□□ 0.92
Taf1dQ9D4V4 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Taf1dQ9D4V4 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.78■□□□□ 0.92
Taf1dQ9D4V4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
Taf1dQ9D4V4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Taf1dQ9D4V4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Taf1dQ9D4V4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Taf1dQ9D4V4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Taf1dQ9D4V4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Taf1dQ9D4V4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Taf1dQ9D4V4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.77■□□□□ 0.92
Taf1dQ9D4V4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.77■□□□□ 0.92
Taf1dQ9D4V4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Taf1dQ9D4V4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Taf1dQ9D4V4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.77■□□□□ 0.92
Taf1dQ9D4V4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Taf1dQ9D4V4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Taf1dQ9D4V4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
Taf1dQ9D4V4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Taf1dQ9D4V4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Taf1dQ9D4V4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Taf1dQ9D4V4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Taf1dQ9D4V4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Taf1dQ9D4V4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Taf1dQ9D4V4 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Taf1dQ9D4V4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Taf1dQ9D4V4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Taf1dQ9D4V4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.76■□□□□ 0.91
Taf1dQ9D4V4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Taf1dQ9D4V4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Taf1dQ9D4V4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Taf1dQ9D4V4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Taf1dQ9D4V4 Gm18856-201ENSMUST00000178096 1374 ntBASIC20.75■□□□□ 0.91
Taf1dQ9D4V4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Taf1dQ9D4V4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Taf1dQ9D4V4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Taf1dQ9D4V4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.75■□□□□ 0.91
Taf1dQ9D4V4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Taf1dQ9D4V4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Taf1dQ9D4V4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Taf1dQ9D4V4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Taf1dQ9D4V4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Taf1dQ9D4V4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Taf1dQ9D4V4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Taf1dQ9D4V4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Taf1dQ9D4V4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC20.74■□□□□ 0.91
Taf1dQ9D4V4 Mir5126-201ENSMUST00000175513 77 ntBASIC20.74■□□□□ 0.91
Taf1dQ9D4V4 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Taf1dQ9D4V4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Taf1dQ9D4V4 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Taf1dQ9D4V4 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.74■□□□□ 0.91
Taf1dQ9D4V4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Taf1dQ9D4V4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Taf1dQ9D4V4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms