Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim42Q9D2H5 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim42Q9D2H5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Trim42Q9D2H5 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trim42Q9D2H5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.36■□□□□ 0.37
Trim42Q9D2H5 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.36■□□□□ 0.37
Trim42Q9D2H5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim42Q9D2H5 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim42Q9D2H5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim42Q9D2H5 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim42Q9D2H5 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim42Q9D2H5 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim42Q9D2H5 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Trim42Q9D2H5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim42Q9D2H5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim42Q9D2H5 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim42Q9D2H5 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim42Q9D2H5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim42Q9D2H5 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim42Q9D2H5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim42Q9D2H5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim42Q9D2H5 Gm27454-201ENSMUST00000185090 204 ntBASIC17.35■□□□□ 0.37
Trim42Q9D2H5 Gm43060-201ENSMUST00000200621 289 ntBASIC17.35■□□□□ 0.37
Trim42Q9D2H5 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim42Q9D2H5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim42Q9D2H5 Gm6139-201ENSMUST00000079261 882 ntBASIC17.35■□□□□ 0.37
Trim42Q9D2H5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim42Q9D2H5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trim42Q9D2H5 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.35■□□□□ 0.37
Trim42Q9D2H5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim42Q9D2H5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim42Q9D2H5 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim42Q9D2H5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim42Q9D2H5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trim42Q9D2H5 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim42Q9D2H5 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim42Q9D2H5 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim42Q9D2H5 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim42Q9D2H5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.33■□□□□ 0.37
Trim42Q9D2H5 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim42Q9D2H5 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim42Q9D2H5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trim42Q9D2H5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim42Q9D2H5 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim42Q9D2H5 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim42Q9D2H5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trim42Q9D2H5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim42Q9D2H5 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim42Q9D2H5 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim42Q9D2H5 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim42Q9D2H5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim42Q9D2H5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim42Q9D2H5 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim42Q9D2H5 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms