Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Lysmd1Q9D0E3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lysmd1Q9D0E3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lysmd1Q9D0E3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Lysmd1Q9D0E3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lysmd1Q9D0E3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Lysmd1Q9D0E3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Lysmd1Q9D0E3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lysmd1Q9D0E3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Lysmd1Q9D0E3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lysmd1Q9D0E3 AA543401-201ENSMUST00000164248 1269 ntBASIC18.64■□□□□ 0.57
Lysmd1Q9D0E3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.64■□□□□ 0.57
Lysmd1Q9D0E3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lysmd1Q9D0E3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lysmd1Q9D0E3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lysmd1Q9D0E3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.64■□□□□ 0.57
Lysmd1Q9D0E3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.64■□□□□ 0.57
Lysmd1Q9D0E3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lysmd1Q9D0E3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Lysmd1Q9D0E3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
Lysmd1Q9D0E3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.63■□□□□ 0.57
Lysmd1Q9D0E3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lysmd1Q9D0E3 Mir3113-201ENSMUST00000175478 76 ntBASIC18.63■□□□□ 0.57
Lysmd1Q9D0E3 Gm27628-201ENSMUST00000184911 107 ntBASIC18.63■□□□□ 0.57
Lysmd1Q9D0E3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.63■□□□□ 0.57
Lysmd1Q9D0E3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.63■□□□□ 0.57
Lysmd1Q9D0E3 AV026068-213ENSMUST00000223675 1171 ntBASIC18.63■□□□□ 0.57
Lysmd1Q9D0E3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lysmd1Q9D0E3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lysmd1Q9D0E3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lysmd1Q9D0E3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Lysmd1Q9D0E3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Lysmd1Q9D0E3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 Gm11424-201ENSMUST00000121929 829 ntBASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lysmd1Q9D0E3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lysmd1Q9D0E3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lysmd1Q9D0E3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Lysmd1Q9D0E3 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Lysmd1Q9D0E3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC18.61■□□□□ 0.57
Lysmd1Q9D0E3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Lysmd1Q9D0E3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC18.61■□□□□ 0.57
Lysmd1Q9D0E3 Gm13418-201ENSMUST00000119097 944 ntBASIC18.61■□□□□ 0.57
Lysmd1Q9D0E3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.61■□□□□ 0.57
Lysmd1Q9D0E3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lysmd1Q9D0E3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lysmd1Q9D0E3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
Lysmd1Q9D0E3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lysmd1Q9D0E3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lysmd1Q9D0E3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lysmd1Q9D0E3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lysmd1Q9D0E3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lysmd1Q9D0E3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lysmd1Q9D0E3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Lysmd1Q9D0E3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lysmd1Q9D0E3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lysmd1Q9D0E3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lysmd1Q9D0E3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.6■□□□□ 0.57
Lysmd1Q9D0E3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.6■□□□□ 0.57
Lysmd1Q9D0E3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC18.6■□□□□ 0.57
Lysmd1Q9D0E3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.6■□□□□ 0.57
Lysmd1Q9D0E3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Lysmd1Q9D0E3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lysmd1Q9D0E3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lysmd1Q9D0E3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.6■□□□□ 0.57
Lysmd1Q9D0E3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lysmd1Q9D0E3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
Lysmd1Q9D0E3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lysmd1Q9D0E3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.59■□□□□ 0.57
Lysmd1Q9D0E3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.59■□□□□ 0.57
Lysmd1Q9D0E3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lysmd1Q9D0E3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Lysmd1Q9D0E3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lysmd1Q9D0E3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Lysmd1Q9D0E3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.59■□□□□ 0.57
Lysmd1Q9D0E3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lysmd1Q9D0E3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lysmd1Q9D0E3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lysmd1Q9D0E3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.59■□□□□ 0.57
Lysmd1Q9D0E3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms