Protein–RNA interactions for Protein: Q9CZB3

Thumpd2, THUMP domain-containing protein 2, mousemouse

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd2Q9CZB3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thumpd2Q9CZB3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thumpd2Q9CZB3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Thumpd2Q9CZB3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thumpd2Q9CZB3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.23■□□□□ 0.51
Thumpd2Q9CZB3 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.23■□□□□ 0.51
Thumpd2Q9CZB3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Thumpd2Q9CZB3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Thumpd2Q9CZB3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.23■□□□□ 0.51
Thumpd2Q9CZB3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Thumpd2Q9CZB3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thumpd2Q9CZB3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Thumpd2Q9CZB3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Thumpd2Q9CZB3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.23■□□□□ 0.51
Thumpd2Q9CZB3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thumpd2Q9CZB3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thumpd2Q9CZB3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Thumpd2Q9CZB3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd2Q9CZB3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd2Q9CZB3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Thumpd2Q9CZB3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd2Q9CZB3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Thumpd2Q9CZB3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Thumpd2Q9CZB3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.22■□□□□ 0.51
Thumpd2Q9CZB3 Gm2559-201ENSMUST00000201323 363 ntBASIC18.22■□□□□ 0.51
Thumpd2Q9CZB3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd2Q9CZB3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd2Q9CZB3 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.22■□□□□ 0.51
Thumpd2Q9CZB3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd2Q9CZB3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd2Q9CZB3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd2Q9CZB3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd2Q9CZB3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd2Q9CZB3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Thumpd2Q9CZB3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thumpd2Q9CZB3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thumpd2Q9CZB3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.21■□□□□ 0.51
Thumpd2Q9CZB3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thumpd2Q9CZB3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.21■□□□□ 0.51
Thumpd2Q9CZB3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.21■□□□□ 0.51
Thumpd2Q9CZB3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Thumpd2Q9CZB3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.21■□□□□ 0.51
Thumpd2Q9CZB3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thumpd2Q9CZB3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.21■□□□□ 0.51
Thumpd2Q9CZB3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Thumpd2Q9CZB3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Thumpd2Q9CZB3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd2Q9CZB3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd2Q9CZB3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Thumpd2Q9CZB3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd2Q9CZB3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd2Q9CZB3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.2■□□□□ 0.5
Thumpd2Q9CZB3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd2Q9CZB3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.2■□□□□ 0.5
Thumpd2Q9CZB3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd2Q9CZB3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Thumpd2Q9CZB3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd2Q9CZB3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd2Q9CZB3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd2Q9CZB3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Thumpd2Q9CZB3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Thumpd2Q9CZB3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd2Q9CZB3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd2Q9CZB3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd2Q9CZB3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Thumpd2Q9CZB3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.19■□□□□ 0.5
Thumpd2Q9CZB3 Gm13401-201ENSMUST00000117074 291 ntBASIC18.19■□□□□ 0.5
Thumpd2Q9CZB3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Thumpd2Q9CZB3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd2Q9CZB3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.19■□□□□ 0.5
Thumpd2Q9CZB3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.19■□□□□ 0.5
Thumpd2Q9CZB3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd2Q9CZB3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd2Q9CZB3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd2Q9CZB3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd2Q9CZB3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd2Q9CZB3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Thumpd2Q9CZB3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Thumpd2Q9CZB3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd2Q9CZB3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd2Q9CZB3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd2Q9CZB3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd2Q9CZB3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd2Q9CZB3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd2Q9CZB3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd2Q9CZB3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd2Q9CZB3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd2Q9CZB3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Thumpd2Q9CZB3 Haglr-201ENSMUST00000100000 2085 ntBASIC18.18■□□□□ 0.5
Thumpd2Q9CZB3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd2Q9CZB3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Thumpd2Q9CZB3 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.18■□□□□ 0.5
Thumpd2Q9CZB3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.18■□□□□ 0.5
Thumpd2Q9CZB3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.18■□□□□ 0.5
Thumpd2Q9CZB3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd2Q9CZB3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd2Q9CZB3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd2Q9CZB3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd2Q9CZB3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Thumpd2Q9CZB3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms