Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.27■□□□□ 0.35
Ssu72Q9CY97 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Ssu72Q9CY97 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssu72Q9CY97 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssu72Q9CY97 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssu72Q9CY97 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssu72Q9CY97 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.26■□□□□ 0.35
Ssu72Q9CY97 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ssu72Q9CY97 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssu72Q9CY97 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssu72Q9CY97 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssu72Q9CY97 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssu72Q9CY97 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Ssu72Q9CY97 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ssu72Q9CY97 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.26■□□□□ 0.35
Ssu72Q9CY97 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.26■□□□□ 0.35
Ssu72Q9CY97 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssu72Q9CY97 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssu72Q9CY97 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.26■□□□□ 0.35
Ssu72Q9CY97 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssu72Q9CY97 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssu72Q9CY97 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssu72Q9CY97 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssu72Q9CY97 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssu72Q9CY97 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssu72Q9CY97 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssu72Q9CY97 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssu72Q9CY97 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssu72Q9CY97 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ssu72Q9CY97 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ssu72Q9CY97 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ssu72Q9CY97 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.25■□□□□ 0.35
Ssu72Q9CY97 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.25■□□□□ 0.35
Ssu72Q9CY97 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.25■□□□□ 0.35
Ssu72Q9CY97 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.25■□□□□ 0.35
Ssu72Q9CY97 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssu72Q9CY97 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssu72Q9CY97 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.25■□□□□ 0.35
Ssu72Q9CY97 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ssu72Q9CY97 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssu72Q9CY97 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssu72Q9CY97 Dancr-204ENSMUST00000132389 2347 ntBASIC17.23■□□□□ 0.35
Ssu72Q9CY97 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ssu72Q9CY97 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssu72Q9CY97 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ssu72Q9CY97 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.23■□□□□ 0.35
Ssu72Q9CY97 Gm10033-202ENSMUST00000211874 928 ntBASIC17.23■□□□□ 0.35
Ssu72Q9CY97 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssu72Q9CY97 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssu72Q9CY97 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssu72Q9CY97 Flg-201ENSMUST00000050758 1488 ntBASIC17.23■□□□□ 0.35
Ssu72Q9CY97 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssu72Q9CY97 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssu72Q9CY97 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ssu72Q9CY97 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssu72Q9CY97 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ssu72Q9CY97 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ssu72Q9CY97 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssu72Q9CY97 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssu72Q9CY97 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssu72Q9CY97 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssu72Q9CY97 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ssu72Q9CY97 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ssu72Q9CY97 Gm11643-201ENSMUST00000119578 864 ntBASIC17.22■□□□□ 0.35
Ssu72Q9CY97 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.22■□□□□ 0.35
Ssu72Q9CY97 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ssu72Q9CY97 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.22■□□□□ 0.35
Ssu72Q9CY97 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssu72Q9CY97 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssu72Q9CY97 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ssu72Q9CY97 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssu72Q9CY97 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ssu72Q9CY97 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.21■□□□□ 0.35
Ssu72Q9CY97 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ssu72Q9CY97 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssu72Q9CY97 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms