Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr1Q9CY50 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.81■□□□□ 0.6
Ssr1Q9CY50 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.81■□□□□ 0.6
Ssr1Q9CY50 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ssr1Q9CY50 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr1Q9CY50 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr1Q9CY50 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.81■□□□□ 0.6
Ssr1Q9CY50 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.81■□□□□ 0.6
Ssr1Q9CY50 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr1Q9CY50 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.81■□□□□ 0.6
Ssr1Q9CY50 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ssr1Q9CY50 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr1Q9CY50 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr1Q9CY50 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ssr1Q9CY50 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr1Q9CY50 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr1Q9CY50 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr1Q9CY50 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr1Q9CY50 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr1Q9CY50 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr1Q9CY50 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr1Q9CY50 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr1Q9CY50 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ssr1Q9CY50 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr1Q9CY50 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.8■□□□□ 0.6
Ssr1Q9CY50 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.8■□□□□ 0.6
Ssr1Q9CY50 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.8■□□□□ 0.6
Ssr1Q9CY50 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.8■□□□□ 0.6
Ssr1Q9CY50 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Ssr1Q9CY50 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr1Q9CY50 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr1Q9CY50 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr1Q9CY50 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr1Q9CY50 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr1Q9CY50 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr1Q9CY50 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr1Q9CY50 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.8■□□□□ 0.6
Ssr1Q9CY50 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr1Q9CY50 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr1Q9CY50 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr1Q9CY50 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr1Q9CY50 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr1Q9CY50 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr1Q9CY50 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr1Q9CY50 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr1Q9CY50 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr1Q9CY50 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ssr1Q9CY50 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr1Q9CY50 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr1Q9CY50 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr1Q9CY50 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr1Q9CY50 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.79■□□□□ 0.6
Ssr1Q9CY50 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.79■□□□□ 0.6
Ssr1Q9CY50 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.79■□□□□ 0.6
Ssr1Q9CY50 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr1Q9CY50 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ssr1Q9CY50 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr1Q9CY50 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr1Q9CY50 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.79■□□□□ 0.6
Ssr1Q9CY50 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr1Q9CY50 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr1Q9CY50 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr1Q9CY50 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr1Q9CY50 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr1Q9CY50 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr1Q9CY50 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr1Q9CY50 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr1Q9CY50 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr1Q9CY50 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr1Q9CY50 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Ssr1Q9CY50 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr1Q9CY50 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ssr1Q9CY50 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.78■□□□□ 0.6
Ssr1Q9CY50 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr1Q9CY50 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.78■□□□□ 0.6
Ssr1Q9CY50 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr1Q9CY50 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr1Q9CY50 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.78■□□□□ 0.6
Ssr1Q9CY50 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.78■□□□□ 0.6
Ssr1Q9CY50 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr1Q9CY50 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr1Q9CY50 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ssr1Q9CY50 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.77■□□□□ 0.6
Ssr1Q9CY50 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssr1Q9CY50 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssr1Q9CY50 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssr1Q9CY50 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssr1Q9CY50 Gm13148-201ENSMUST00000118892 745 ntBASIC18.77■□□□□ 0.6
Ssr1Q9CY50 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssr1Q9CY50 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssr1Q9CY50 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ssr1Q9CY50 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.77■□□□□ 0.6
Ssr1Q9CY50 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ssr1Q9CY50 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssr1Q9CY50 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ssr1Q9CY50 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ssr1Q9CY50 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ssr1Q9CY50 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ssr1Q9CY50 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ssr1Q9CY50 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms