Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.45■□□□□ 0.86
Smc3Q9CW03 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc3Q9CW03 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc3Q9CW03 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.44■□□□□ 0.86
Smc3Q9CW03 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc3Q9CW03 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Smc3Q9CW03 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.44■□□□□ 0.86
Smc3Q9CW03 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.44■□□□□ 0.86
Smc3Q9CW03 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc3Q9CW03 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc3Q9CW03 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc3Q9CW03 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc3Q9CW03 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc3Q9CW03 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc3Q9CW03 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smc3Q9CW03 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc3Q9CW03 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc3Q9CW03 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Smc3Q9CW03 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc3Q9CW03 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc3Q9CW03 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc3Q9CW03 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.43■□□□□ 0.86
Smc3Q9CW03 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.43■□□□□ 0.86
Smc3Q9CW03 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.43■□□□□ 0.86
Smc3Q9CW03 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc3Q9CW03 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.43■□□□□ 0.86
Smc3Q9CW03 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.43■□□□□ 0.86
Smc3Q9CW03 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc3Q9CW03 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc3Q9CW03 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc3Q9CW03 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc3Q9CW03 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc3Q9CW03 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc3Q9CW03 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc3Q9CW03 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc3Q9CW03 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc3Q9CW03 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc3Q9CW03 Gm5408-201ENSMUST00000197998 747 ntBASIC20.42■□□□□ 0.86
Smc3Q9CW03 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.42■□□□□ 0.86
Smc3Q9CW03 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Smc3Q9CW03 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Smc3Q9CW03 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc3Q9CW03 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc3Q9CW03 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc3Q9CW03 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smc3Q9CW03 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Smc3Q9CW03 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc3Q9CW03 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc3Q9CW03 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc3Q9CW03 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc3Q9CW03 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Smc3Q9CW03 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Smc3Q9CW03 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc3Q9CW03 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Smc3Q9CW03 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smc3Q9CW03 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc3Q9CW03 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc3Q9CW03 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.41■□□□□ 0.86
Smc3Q9CW03 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smc3Q9CW03 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Smc3Q9CW03 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smc3Q9CW03 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Smc3Q9CW03 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc3Q9CW03 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smc3Q9CW03 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc3Q9CW03 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc3Q9CW03 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc3Q9CW03 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc3Q9CW03 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Smc3Q9CW03 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Smc3Q9CW03 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.4■□□□□ 0.86
Smc3Q9CW03 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc3Q9CW03 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Smc3Q9CW03 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc3Q9CW03 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc3Q9CW03 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Smc3Q9CW03 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.4■□□□□ 0.86
Smc3Q9CW03 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc3Q9CW03 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Smc3Q9CW03 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smc3Q9CW03 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smc3Q9CW03 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Smc3Q9CW03 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smc3Q9CW03 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc3Q9CW03 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smc3Q9CW03 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Smc3Q9CW03 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc3Q9CW03 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.39■□□□□ 0.85
Smc3Q9CW03 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.39■□□□□ 0.85
Smc3Q9CW03 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Smc3Q9CW03 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Smc3Q9CW03 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.38■□□□□ 0.85
Smc3Q9CW03 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc3Q9CW03 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc3Q9CW03 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Smc3Q9CW03 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc3Q9CW03 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc3Q9CW03 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc3Q9CW03 Gm12933-201ENSMUST00000120203 872 ntBASIC20.38■□□□□ 0.85
Smc3Q9CW03 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms