Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.27■□□□□ 0.35
Lrrc40Q9CRC8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lrrc40Q9CRC8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc40Q9CRC8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc40Q9CRC8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.24■□□□□ 0.35
Lrrc40Q9CRC8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrrc40Q9CRC8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.24■□□□□ 0.35
Lrrc40Q9CRC8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrrc40Q9CRC8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.24■□□□□ 0.35
Lrrc40Q9CRC8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrrc40Q9CRC8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.24■□□□□ 0.35
Lrrc40Q9CRC8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrrc40Q9CRC8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrrc40Q9CRC8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lrrc40Q9CRC8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lrrc40Q9CRC8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.23■□□□□ 0.35
Lrrc40Q9CRC8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Lrrc40Q9CRC8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrrc40Q9CRC8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Lrrc40Q9CRC8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Lrrc40Q9CRC8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrrc40Q9CRC8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.23■□□□□ 0.35
Lrrc40Q9CRC8 Gm42545-201ENSMUST00000202755 922 ntBASIC17.23■□□□□ 0.35
Lrrc40Q9CRC8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.23■□□□□ 0.35
Lrrc40Q9CRC8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrrc40Q9CRC8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrrc40Q9CRC8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Lrrc40Q9CRC8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrrc40Q9CRC8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrrc40Q9CRC8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lrrc40Q9CRC8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrrc40Q9CRC8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrrc40Q9CRC8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lrrc40Q9CRC8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Lrrc40Q9CRC8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Lrrc40Q9CRC8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Lrrc40Q9CRC8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrc40Q9CRC8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrc40Q9CRC8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Lrrc40Q9CRC8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrc40Q9CRC8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.22■□□□□ 0.35
Lrrc40Q9CRC8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.22■□□□□ 0.35
Lrrc40Q9CRC8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrc40Q9CRC8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrc40Q9CRC8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrc40Q9CRC8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrc40Q9CRC8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrc40Q9CRC8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrc40Q9CRC8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrc40Q9CRC8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrc40Q9CRC8 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.22■□□□□ 0.35
Lrrc40Q9CRC8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lrrc40Q9CRC8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms