Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.78■□□□□ 0.44
Cldnd1Q9CQX5 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldnd1Q9CQX5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.78■□□□□ 0.44
Cldnd1Q9CQX5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.78■□□□□ 0.44
Cldnd1Q9CQX5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldnd1Q9CQX5 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cldnd1Q9CQX5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cldnd1Q9CQX5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldnd1Q9CQX5 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldnd1Q9CQX5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldnd1Q9CQX5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.77■□□□□ 0.44
Cldnd1Q9CQX5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cldnd1Q9CQX5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cldnd1Q9CQX5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cldnd1Q9CQX5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cldnd1Q9CQX5 Gm18195-201ENSMUST00000207604 706 ntBASIC17.77■□□□□ 0.44
Cldnd1Q9CQX5 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Cldnd1Q9CQX5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldnd1Q9CQX5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldnd1Q9CQX5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cldnd1Q9CQX5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cldnd1Q9CQX5 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cldnd1Q9CQX5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 Gm18206-201ENSMUST00000207027 926 ntBASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldnd1Q9CQX5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldnd1Q9CQX5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldnd1Q9CQX5 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldnd1Q9CQX5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.75■□□□□ 0.43
Cldnd1Q9CQX5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldnd1Q9CQX5 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.75■□□□□ 0.43
Cldnd1Q9CQX5 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cldnd1Q9CQX5 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.75■□□□□ 0.43
Cldnd1Q9CQX5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cldnd1Q9CQX5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldnd1Q9CQX5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cldnd1Q9CQX5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldnd1Q9CQX5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cldnd1Q9CQX5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.74■□□□□ 0.43
Cldnd1Q9CQX5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cldnd1Q9CQX5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldnd1Q9CQX5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldnd1Q9CQX5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldnd1Q9CQX5 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cldnd1Q9CQX5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.74■□□□□ 0.43
Cldnd1Q9CQX5 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.74■□□□□ 0.43
Cldnd1Q9CQX5 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cldnd1Q9CQX5 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cldnd1Q9CQX5 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.74■□□□□ 0.43
Cldnd1Q9CQX5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldnd1Q9CQX5 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldnd1Q9CQX5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cldnd1Q9CQX5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldnd1Q9CQX5 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldnd1Q9CQX5 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldnd1Q9CQX5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldnd1Q9CQX5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cldnd1Q9CQX5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cldnd1Q9CQX5 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Cldnd1Q9CQX5 Gm37935-201ENSMUST00000192012 982 ntBASIC17.73■□□□□ 0.43
Cldnd1Q9CQX5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldnd1Q9CQX5 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cldnd1Q9CQX5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cldnd1Q9CQX5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cldnd1Q9CQX5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldnd1Q9CQX5 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldnd1Q9CQX5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldnd1Q9CQX5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cldnd1Q9CQX5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cldnd1Q9CQX5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.72■□□□□ 0.43
Cldnd1Q9CQX5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldnd1Q9CQX5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldnd1Q9CQX5 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldnd1Q9CQX5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.72■□□□□ 0.43
Cldnd1Q9CQX5 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Cldnd1Q9CQX5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.72■□□□□ 0.43
Cldnd1Q9CQX5 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.72■□□□□ 0.43
Cldnd1Q9CQX5 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.72■□□□□ 0.43
Cldnd1Q9CQX5 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.72■□□□□ 0.43
Cldnd1Q9CQX5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cldnd1Q9CQX5 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms