Protein–RNA interactions for Protein: Q9CQC8

Spg21, Maspardin, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg21Q9CQC8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Spg21Q9CQC8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Spg21Q9CQC8 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.17■□□□□ 0.5
Spg21Q9CQC8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Spg21Q9CQC8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Spg21Q9CQC8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Spg21Q9CQC8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Spg21Q9CQC8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Spg21Q9CQC8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Spg21Q9CQC8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Spg21Q9CQC8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Spg21Q9CQC8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Spg21Q9CQC8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Spg21Q9CQC8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Spg21Q9CQC8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Spg21Q9CQC8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Spg21Q9CQC8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.17■□□□□ 0.5
Spg21Q9CQC8 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.17■□□□□ 0.5
Spg21Q9CQC8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Spg21Q9CQC8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Spg21Q9CQC8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Spg21Q9CQC8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Spg21Q9CQC8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Spg21Q9CQC8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Spg21Q9CQC8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Spg21Q9CQC8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.16■□□□□ 0.5
Spg21Q9CQC8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.16■□□□□ 0.5
Spg21Q9CQC8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Spg21Q9CQC8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Spg21Q9CQC8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Spg21Q9CQC8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Spg21Q9CQC8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Spg21Q9CQC8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Spg21Q9CQC8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Spg21Q9CQC8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Spg21Q9CQC8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Spg21Q9CQC8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.16■□□□□ 0.5
Spg21Q9CQC8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Spg21Q9CQC8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Spg21Q9CQC8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Spg21Q9CQC8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Spg21Q9CQC8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Spg21Q9CQC8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.15■□□□□ 0.5
Spg21Q9CQC8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Spg21Q9CQC8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Spg21Q9CQC8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Spg21Q9CQC8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Spg21Q9CQC8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.15■□□□□ 0.5
Spg21Q9CQC8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Spg21Q9CQC8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Spg21Q9CQC8 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.15■□□□□ 0.5
Spg21Q9CQC8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Spg21Q9CQC8 Gm37722-201ENSMUST00000193757 208 ntBASIC18.15■□□□□ 0.5
Spg21Q9CQC8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Spg21Q9CQC8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Spg21Q9CQC8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Spg21Q9CQC8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Spg21Q9CQC8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Spg21Q9CQC8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Spg21Q9CQC8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Spg21Q9CQC8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Spg21Q9CQC8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Spg21Q9CQC8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Spg21Q9CQC8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Spg21Q9CQC8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
Spg21Q9CQC8 Idnk-204ENSMUST00000226010 1898 ntBASIC18.14■□□□□ 0.49
Spg21Q9CQC8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Spg21Q9CQC8 Fst-202ENSMUST00000223640 2612 ntBASIC18.14■□□□□ 0.49
Spg21Q9CQC8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Spg21Q9CQC8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Spg21Q9CQC8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Spg21Q9CQC8 Gm7153-201ENSMUST00000117092 455 ntBASIC18.14■□□□□ 0.49
Spg21Q9CQC8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Spg21Q9CQC8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Spg21Q9CQC8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Spg21Q9CQC8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Spg21Q9CQC8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Spg21Q9CQC8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Spg21Q9CQC8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Spg21Q9CQC8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Spg21Q9CQC8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Spg21Q9CQC8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.14■□□□□ 0.49
Spg21Q9CQC8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.13■□□□□ 0.49
Spg21Q9CQC8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Spg21Q9CQC8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Spg21Q9CQC8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Spg21Q9CQC8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Spg21Q9CQC8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.13■□□□□ 0.49
Spg21Q9CQC8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Spg21Q9CQC8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Spg21Q9CQC8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Spg21Q9CQC8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Spg21Q9CQC8 Mir770-201ENSMUST00000103252 94 ntBASIC18.13■□□□□ 0.49
Spg21Q9CQC8 Mir3081-201ENSMUST00000175305 84 ntBASIC18.13■□□□□ 0.49
Spg21Q9CQC8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Spg21Q9CQC8 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.13■□□□□ 0.49
Spg21Q9CQC8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Spg21Q9CQC8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Spg21Q9CQC8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Spg21Q9CQC8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms