Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Mir5131-201ENSMUST00000175426 93 ntBASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Gm2756-201ENSMUST00000195851 400 ntBASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Gm15372-201ENSMUST00000120729 834 ntBASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh23Q99PF4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.75■□□□□ 0.43
Cdh23Q99PF4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Cdh23Q99PF4 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh23Q99PF4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh23Q99PF4 Gm8000-201ENSMUST00000188378 592 ntBASIC17.75■□□□□ 0.43
Cdh23Q99PF4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.75■□□□□ 0.43
Cdh23Q99PF4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh23Q99PF4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cdh23Q99PF4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh23Q99PF4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh23Q99PF4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh23Q99PF4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.74■□□□□ 0.43
Cdh23Q99PF4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.74■□□□□ 0.43
Cdh23Q99PF4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh23Q99PF4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh23Q99PF4 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.74■□□□□ 0.43
Cdh23Q99PF4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh23Q99PF4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh23Q99PF4 Gm14822-201ENSMUST00000122247 291 ntBASIC17.74■□□□□ 0.43
Cdh23Q99PF4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh23Q99PF4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.74■□□□□ 0.43
Cdh23Q99PF4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.74■□□□□ 0.43
Cdh23Q99PF4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh23Q99PF4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.74■□□□□ 0.43
Cdh23Q99PF4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh23Q99PF4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh23Q99PF4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh23Q99PF4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh23Q99PF4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh23Q99PF4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cdh23Q99PF4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cdh23Q99PF4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.72■□□□□ 0.43
Cdh23Q99PF4 Gm43438-201ENSMUST00000198133 379 ntBASIC17.72■□□□□ 0.43
Cdh23Q99PF4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh23Q99PF4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh23Q99PF4 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh23Q99PF4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cdh23Q99PF4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.72■□□□□ 0.43
Cdh23Q99PF4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.72■□□□□ 0.43
Cdh23Q99PF4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh23Q99PF4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh23Q99PF4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh23Q99PF4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh23Q99PF4 Gm11779-201ENSMUST00000118541 368 ntBASIC17.71■□□□□ 0.43
Cdh23Q99PF4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh23Q99PF4 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Cdh23Q99PF4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh23Q99PF4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh23Q99PF4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh23Q99PF4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh23Q99PF4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cdh23Q99PF4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cdh23Q99PF4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms