Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.92■□□□□ 0.3
Msh4Q99MT2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh4Q99MT2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh4Q99MT2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh4Q99MT2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh4Q99MT2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh4Q99MT2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh4Q99MT2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh4Q99MT2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Msh4Q99MT2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh4Q99MT2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh4Q99MT2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh4Q99MT2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.91■□□□□ 0.3
Msh4Q99MT2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Msh4Q99MT2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.91■□□□□ 0.3
Msh4Q99MT2 Gm15375-201ENSMUST00000119510 849 ntBASIC16.91■□□□□ 0.3
Msh4Q99MT2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Msh4Q99MT2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.91■□□□□ 0.3
Msh4Q99MT2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.91■□□□□ 0.3
Msh4Q99MT2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh4Q99MT2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Msh4Q99MT2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh4Q99MT2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh4Q99MT2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh4Q99MT2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh4Q99MT2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh4Q99MT2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh4Q99MT2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.9■□□□□ 0.3
Msh4Q99MT2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Msh4Q99MT2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh4Q99MT2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh4Q99MT2 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.9■□□□□ 0.3
Msh4Q99MT2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh4Q99MT2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh4Q99MT2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Msh4Q99MT2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh4Q99MT2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh4Q99MT2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Msh4Q99MT2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Msh4Q99MT2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Msh4Q99MT2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh4Q99MT2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Msh4Q99MT2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Msh4Q99MT2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh4Q99MT2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Msh4Q99MT2 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.89■□□□□ 0.29
Msh4Q99MT2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh4Q99MT2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.89■□□□□ 0.29
Msh4Q99MT2 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.89■□□□□ 0.29
Msh4Q99MT2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh4Q99MT2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh4Q99MT2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh4Q99MT2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh4Q99MT2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh4Q99MT2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh4Q99MT2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh4Q99MT2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh4Q99MT2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh4Q99MT2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh4Q99MT2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh4Q99MT2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Msh4Q99MT2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh4Q99MT2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Msh4Q99MT2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh4Q99MT2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh4Q99MT2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh4Q99MT2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
Msh4Q99MT2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.88■□□□□ 0.29
Msh4Q99MT2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Msh4Q99MT2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Msh4Q99MT2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh4Q99MT2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh4Q99MT2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Msh4Q99MT2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Msh4Q99MT2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh4Q99MT2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Msh4Q99MT2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Msh4Q99MT2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh4Q99MT2 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.88■□□□□ 0.29
Msh4Q99MT2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh4Q99MT2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Msh4Q99MT2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.87■□□□□ 0.29
Msh4Q99MT2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh4Q99MT2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh4Q99MT2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh4Q99MT2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Msh4Q99MT2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Msh4Q99MT2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh4Q99MT2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh4Q99MT2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.87■□□□□ 0.29
Msh4Q99MT2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh4Q99MT2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Msh4Q99MT2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.87■□□□□ 0.29
Msh4Q99MT2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Msh4Q99MT2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.87■□□□□ 0.29
Msh4Q99MT2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh4Q99MT2 Gm6576-201ENSMUST00000169678 883 ntBASIC16.87■□□□□ 0.29
Msh4Q99MT2 Gm8969-201ENSMUST00000199694 526 ntBASIC16.87■□□□□ 0.29
Msh4Q99MT2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh4Q99MT2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms