Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prdm9Q96EQ9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prdm9Q96EQ9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.09■□□□□ 0.33
Prdm9Q96EQ9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prdm9Q96EQ9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prdm9Q96EQ9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Prdm9Q96EQ9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.09■□□□□ 0.33
Prdm9Q96EQ9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Prdm9Q96EQ9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.09■□□□□ 0.33
Prdm9Q96EQ9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prdm9Q96EQ9 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.09■□□□□ 0.33
Prdm9Q96EQ9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prdm9Q96EQ9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.09■□□□□ 0.33
Prdm9Q96EQ9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.09■□□□□ 0.33
Prdm9Q96EQ9 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.09■□□□□ 0.33
Prdm9Q96EQ9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prdm9Q96EQ9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.09■□□□□ 0.33
Prdm9Q96EQ9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prdm9Q96EQ9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prdm9Q96EQ9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.09■□□□□ 0.33
Prdm9Q96EQ9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Prdm9Q96EQ9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prdm9Q96EQ9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prdm9Q96EQ9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prdm9Q96EQ9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Prdm9Q96EQ9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Prdm9Q96EQ9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.08■□□□□ 0.32
Prdm9Q96EQ9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prdm9Q96EQ9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Prdm9Q96EQ9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prdm9Q96EQ9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prdm9Q96EQ9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 Mir5130-201ENSMUST00000175160 84 ntBASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.07■□□□□ 0.32
Prdm9Q96EQ9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.06■□□□□ 0.32
Prdm9Q96EQ9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prdm9Q96EQ9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.06■□□□□ 0.32
Prdm9Q96EQ9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Prdm9Q96EQ9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prdm9Q96EQ9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Prdm9Q96EQ9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prdm9Q96EQ9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prdm9Q96EQ9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prdm9Q96EQ9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Prdm9Q96EQ9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Prdm9Q96EQ9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prdm9Q96EQ9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prdm9Q96EQ9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prdm9Q96EQ9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prdm9Q96EQ9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.06■□□□□ 0.32
Prdm9Q96EQ9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prdm9Q96EQ9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prdm9Q96EQ9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Prdm9Q96EQ9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prdm9Q96EQ9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Prdm9Q96EQ9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prdm9Q96EQ9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Prdm9Q96EQ9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Prdm9Q96EQ9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.05■□□□□ 0.32
Prdm9Q96EQ9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prdm9Q96EQ9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.05■□□□□ 0.32
Prdm9Q96EQ9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Prdm9Q96EQ9 Gm16061-201ENSMUST00000122167 857 ntBASIC17.05■□□□□ 0.32
Prdm9Q96EQ9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.05■□□□□ 0.32
Prdm9Q96EQ9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prdm9Q96EQ9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prdm9Q96EQ9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prdm9Q96EQ9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prdm9Q96EQ9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prdm9Q96EQ9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prdm9Q96EQ9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prdm9Q96EQ9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prdm9Q96EQ9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prdm9Q96EQ9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prdm9Q96EQ9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prdm9Q96EQ9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prdm9Q96EQ9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prdm9Q96EQ9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Prdm9Q96EQ9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prdm9Q96EQ9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prdm9Q96EQ9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms