Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhb2Q91Y00 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb2Q91Y00 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb2Q91Y00 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Pcdhb2Q91Y00 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb2Q91Y00 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb2Q91Y00 Gm21814-202ENSMUST00000203277 873 ntBASIC18.47■□□□□ 0.55
Pcdhb2Q91Y00 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.47■□□□□ 0.55
Pcdhb2Q91Y00 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.47■□□□□ 0.55
Pcdhb2Q91Y00 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb2Q91Y00 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb2Q91Y00 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb2Q91Y00 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb2Q91Y00 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb2Q91Y00 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb2Q91Y00 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhb2Q91Y00 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdhb2Q91Y00 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.46■□□□□ 0.54
Pcdhb2Q91Y00 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb2Q91Y00 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb2Q91Y00 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb2Q91Y00 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb2Q91Y00 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.45■□□□□ 0.54
Pcdhb2Q91Y00 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb2Q91Y00 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb2Q91Y00 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb2Q91Y00 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.45■□□□□ 0.54
Pcdhb2Q91Y00 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb2Q91Y00 Gm30025-201ENSMUST00000218555 728 ntBASIC18.45■□□□□ 0.54
Pcdhb2Q91Y00 Grk6-206ENSMUST00000224995 2971 ntBASIC18.45■□□□□ 0.54
Pcdhb2Q91Y00 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb2Q91Y00 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb2Q91Y00 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb2Q91Y00 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb2Q91Y00 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb2Q91Y00 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb2Q91Y00 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.45■□□□□ 0.54
Pcdhb2Q91Y00 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb2Q91Y00 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb2Q91Y00 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 Mir7071-201ENSMUST00000184847 69 ntBASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 Gm3375-201ENSMUST00000203929 796 ntBASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb2Q91Y00 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb2Q91Y00 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdhb2Q91Y00 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb2Q91Y00 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhb2Q91Y00 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb2Q91Y00 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb2Q91Y00 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.43■□□□□ 0.54
Pcdhb2Q91Y00 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.43■□□□□ 0.54
Pcdhb2Q91Y00 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdhb2Q91Y00 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb2Q91Y00 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb2Q91Y00 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb2Q91Y00 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb2Q91Y00 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms