Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb3Q91XZ7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb3Q91XZ7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb3Q91XZ7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhb3Q91XZ7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhb3Q91XZ7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb3Q91XZ7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb3Q91XZ7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhb3Q91XZ7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb3Q91XZ7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb3Q91XZ7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb3Q91XZ7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb3Q91XZ7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb3Q91XZ7 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb3Q91XZ7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb3Q91XZ7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb3Q91XZ7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb3Q91XZ7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb3Q91XZ7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb3Q91XZ7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb3Q91XZ7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb3Q91XZ7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb3Q91XZ7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb3Q91XZ7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb3Q91XZ7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Pcdhb3Q91XZ7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb3Q91XZ7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb3Q91XZ7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb3Q91XZ7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb3Q91XZ7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.33■□□□□ 0.36
Pcdhb3Q91XZ7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhb3Q91XZ7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb3Q91XZ7 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb3Q91XZ7 Tgds-204ENSMUST00000228543 1594 ntBASIC17.32■□□□□ 0.36
Pcdhb3Q91XZ7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Pcdhb3Q91XZ7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb3Q91XZ7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhb3Q91XZ7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb3Q91XZ7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Pcdhb3Q91XZ7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb3Q91XZ7 Gm13216-201ENSMUST00000117145 591 ntBASIC17.32■□□□□ 0.36
Pcdhb3Q91XZ7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb3Q91XZ7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb3Q91XZ7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb3Q91XZ7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhb3Q91XZ7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb3Q91XZ7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 Mir5133-201ENSMUST00000174955 77 ntBASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb3Q91XZ7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb3Q91XZ7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb3Q91XZ7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb3Q91XZ7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb3Q91XZ7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb3Q91XZ7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhb3Q91XZ7 Gm13534-201ENSMUST00000121169 513 ntBASIC17.3■□□□□ 0.36
Pcdhb3Q91XZ7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms