Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Gm37856-201ENSMUST00000191634 999 ntBASIC18.4■□□□□ 0.54
Pcdhgb4Q91XX6 Gm42545-201ENSMUST00000202755 922 ntBASIC18.4■□□□□ 0.54
Pcdhgb4Q91XX6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb4Q91XX6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb4Q91XX6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb4Q91XX6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb4Q91XX6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb4Q91XX6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb4Q91XX6 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb4Q91XX6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb4Q91XX6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgb4Q91XX6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhgb4Q91XX6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhgb4Q91XX6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhgb4Q91XX6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhgb4Q91XX6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhgb4Q91XX6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgb4Q91XX6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhgb4Q91XX6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgb4Q91XX6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgb4Q91XX6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgb4Q91XX6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgb4Q91XX6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgb4Q91XX6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pcdhgb4Q91XX6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgb4Q91XX6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhgb4Q91XX6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb4Q91XX6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb4Q91XX6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb4Q91XX6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb4Q91XX6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb4Q91XX6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Pcdhgb4Q91XX6 Gm11643-201ENSMUST00000119578 864 ntBASIC18.38■□□□□ 0.53
Pcdhgb4Q91XX6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb4Q91XX6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhgb4Q91XX6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb4Q91XX6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb4Q91XX6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhgb4Q91XX6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb4Q91XX6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb4Q91XX6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb4Q91XX6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb4Q91XX6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhgb4Q91XX6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhgb4Q91XX6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgb4Q91XX6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 Gm18025-201ENSMUST00000221733 862 ntBASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgb4Q91XX6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhgb4Q91XX6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb4Q91XX6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhgb4Q91XX6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb4Q91XX6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Pcdhgb4Q91XX6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhgb4Q91XX6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb4Q91XX6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb4Q91XX6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb4Q91XX6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb4Q91XX6 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb4Q91XX6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb4Q91XX6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb4Q91XX6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pcdhgb4Q91XX6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgb4Q91XX6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhgb4Q91XX6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgb4Q91XX6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgb4Q91XX6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgb4Q91XX6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdhgb4Q91XX6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhgb4Q91XX6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgb4Q91XX6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgb4Q91XX6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgb4Q91XX6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdhgb4Q91XX6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgb4Q91XX6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgb4Q91XX6 Trmt13-210ENSMUST00000198454 880 ntBASIC18.35■□□□□ 0.53
Pcdhgb4Q91XX6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhgb4Q91XX6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhgb4Q91XX6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhgb4Q91XX6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms