Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhgb5Q91XX5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb5Q91XX5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb5Q91XX5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pcdhgb5Q91XX5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb5Q91XX5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
Pcdhgb5Q91XX5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb5Q91XX5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhgb5Q91XX5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.24■□□□□ 0.35
Pcdhgb5Q91XX5 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb5Q91XX5 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.24■□□□□ 0.35
Pcdhgb5Q91XX5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb5Q91XX5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb5Q91XX5 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.24■□□□□ 0.35
Pcdhgb5Q91XX5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb5Q91XX5 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb5Q91XX5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhgb5Q91XX5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb5Q91XX5 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb5Q91XX5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb5Q91XX5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb5Q91XX5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Pcdhgb5Q91XX5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.23■□□□□ 0.35
Pcdhgb5Q91XX5 Gm7370-201ENSMUST00000219471 767 ntBASIC17.23■□□□□ 0.35
Pcdhgb5Q91XX5 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Pcdhgb5Q91XX5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb5Q91XX5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb5Q91XX5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhgb5Q91XX5 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.23■□□□□ 0.35
Pcdhgb5Q91XX5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Pcdhgb5Q91XX5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 Golph3-205ENSMUST00000228671 2842 ntBASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 Gm9013-201ENSMUST00000132939 882 ntBASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 Gm7213-201ENSMUST00000215977 950 ntBASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhgb5Q91XX5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb5Q91XX5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhgb5Q91XX5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb5Q91XX5 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb5Q91XX5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb5Q91XX5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb5Q91XX5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhgb5Q91XX5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhgb5Q91XX5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcdhgb5Q91XX5 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb5Q91XX5 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb5Q91XX5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhgb5Q91XX5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhgb5Q91XX5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcdhgb5Q91XX5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhgb5Q91XX5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhgb5Q91XX5 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb5Q91XX5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb5Q91XX5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb5Q91XX5 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb5Q91XX5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb5Q91XX5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhgb5Q91XX5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb5Q91XX5 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.2■□□□□ 0.34
Pcdhgb5Q91XX5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb5Q91XX5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcdhgb5Q91XX5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb5Q91XX5 Gm17661-201ENSMUST00000170317 270 ntBASIC17.2■□□□□ 0.34
Pcdhgb5Q91XX5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhgb5Q91XX5 Gm5587-201ENSMUST00000206270 674 ntBASIC17.2■□□□□ 0.34
Pcdhgb5Q91XX5 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb5Q91XX5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcdhgb5Q91XX5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb5Q91XX5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb5Q91XX5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhgb5Q91XX5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhgb5Q91XX5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb5Q91XX5 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb5Q91XX5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb5Q91XX5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb5Q91XX5 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb5Q91XX5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms