Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb11Q91UZ8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb11Q91UZ8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb11Q91UZ8 Gm715-201ENSMUST00000117865 831 ntBASIC17.8■□□□□ 0.44
Pcdhb11Q91UZ8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb11Q91UZ8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb11Q91UZ8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb11Q91UZ8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb11Q91UZ8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb11Q91UZ8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb11Q91UZ8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb11Q91UZ8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb11Q91UZ8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb11Q91UZ8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Pcdhb11Q91UZ8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.79■□□□□ 0.44
Pcdhb11Q91UZ8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb11Q91UZ8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb11Q91UZ8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb11Q91UZ8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcdhb11Q91UZ8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhb11Q91UZ8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcdhb11Q91UZ8 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.79■□□□□ 0.44
Pcdhb11Q91UZ8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb11Q91UZ8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pcdhb11Q91UZ8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdhb11Q91UZ8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdhb11Q91UZ8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb11Q91UZ8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb11Q91UZ8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhb11Q91UZ8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb11Q91UZ8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb11Q91UZ8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb11Q91UZ8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb11Q91UZ8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb11Q91UZ8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb11Q91UZ8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb11Q91UZ8 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.78■□□□□ 0.44
Pcdhb11Q91UZ8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb11Q91UZ8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb11Q91UZ8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdhb11Q91UZ8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb11Q91UZ8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb11Q91UZ8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhb11Q91UZ8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb11Q91UZ8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb11Q91UZ8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
Pcdhb11Q91UZ8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb11Q91UZ8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb11Q91UZ8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb11Q91UZ8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb11Q91UZ8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdhb11Q91UZ8 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.77■□□□□ 0.44
Pcdhb11Q91UZ8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb11Q91UZ8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb11Q91UZ8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.77■□□□□ 0.44
Pcdhb11Q91UZ8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb11Q91UZ8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb11Q91UZ8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb11Q91UZ8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb11Q91UZ8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.77■□□□□ 0.44
Pcdhb11Q91UZ8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb11Q91UZ8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Pcdhb11Q91UZ8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb11Q91UZ8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb11Q91UZ8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb11Q91UZ8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Pcdhb11Q91UZ8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb11Q91UZ8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb11Q91UZ8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb11Q91UZ8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb11Q91UZ8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb11Q91UZ8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb11Q91UZ8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb11Q91UZ8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb11Q91UZ8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb11Q91UZ8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhb11Q91UZ8 Gm24841-201ENSMUST00000158676 357 ntBASIC17.76■□□□□ 0.43
Pcdhb11Q91UZ8 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.76■□□□□ 0.43
Pcdhb11Q91UZ8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.76■□□□□ 0.43
Pcdhb11Q91UZ8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb11Q91UZ8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb11Q91UZ8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.76■□□□□ 0.43
Pcdhb11Q91UZ8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb11Q91UZ8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb11Q91UZ8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb11Q91UZ8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb11Q91UZ8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb11Q91UZ8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Pcdhb11Q91UZ8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb11Q91UZ8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb11Q91UZ8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb11Q91UZ8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.75■□□□□ 0.43
Pcdhb11Q91UZ8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb11Q91UZ8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Pcdhb11Q91UZ8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdhb11Q91UZ8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb11Q91UZ8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhb11Q91UZ8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb11Q91UZ8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb11Q91UZ8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms