Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SfpqQ8VIJ6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SfpqQ8VIJ6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Gm2399-201ENSMUST00000104944 225 ntBASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Mir8112-201ENSMUST00000184382 131 ntBASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Gm42642-201ENSMUST00000200683 355 ntBASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Gm6365-201ENSMUST00000054711 744 ntBASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.37■□□□□ 0.53
SfpqQ8VIJ6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SfpqQ8VIJ6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SfpqQ8VIJ6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SfpqQ8VIJ6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SfpqQ8VIJ6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SfpqQ8VIJ6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.36■□□□□ 0.53
SfpqQ8VIJ6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SfpqQ8VIJ6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SfpqQ8VIJ6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SfpqQ8VIJ6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SfpqQ8VIJ6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SfpqQ8VIJ6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SfpqQ8VIJ6 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SfpqQ8VIJ6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SfpqQ8VIJ6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SfpqQ8VIJ6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SfpqQ8VIJ6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.35■□□□□ 0.53
SfpqQ8VIJ6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SfpqQ8VIJ6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SfpqQ8VIJ6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
SfpqQ8VIJ6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.35■□□□□ 0.53
SfpqQ8VIJ6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.35■□□□□ 0.53
SfpqQ8VIJ6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SfpqQ8VIJ6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SfpqQ8VIJ6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SfpqQ8VIJ6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.35■□□□□ 0.53
SfpqQ8VIJ6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SfpqQ8VIJ6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SfpqQ8VIJ6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SfpqQ8VIJ6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SfpqQ8VIJ6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SfpqQ8VIJ6 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.34■□□□□ 0.53
SfpqQ8VIJ6 AV356131-201ENSMUST00000206201 750 ntBASIC18.34■□□□□ 0.53
SfpqQ8VIJ6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.34■□□□□ 0.53
SfpqQ8VIJ6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.34■□□□□ 0.53
SfpqQ8VIJ6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SfpqQ8VIJ6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SfpqQ8VIJ6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SfpqQ8VIJ6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SfpqQ8VIJ6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SfpqQ8VIJ6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SfpqQ8VIJ6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SfpqQ8VIJ6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SfpqQ8VIJ6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SfpqQ8VIJ6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
SfpqQ8VIJ6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SfpqQ8VIJ6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.33■□□□□ 0.53
SfpqQ8VIJ6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SfpqQ8VIJ6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SfpqQ8VIJ6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SfpqQ8VIJ6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SfpqQ8VIJ6 Gm7291-201ENSMUST00000199147 382 ntBASIC18.33■□□□□ 0.52
SfpqQ8VIJ6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SfpqQ8VIJ6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SfpqQ8VIJ6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SfpqQ8VIJ6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SfpqQ8VIJ6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SfpqQ8VIJ6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SfpqQ8VIJ6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SfpqQ8VIJ6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SfpqQ8VIJ6 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SfpqQ8VIJ6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SfpqQ8VIJ6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SfpqQ8VIJ6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SfpqQ8VIJ6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
SfpqQ8VIJ6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.32■□□□□ 0.52
SfpqQ8VIJ6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SfpqQ8VIJ6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SfpqQ8VIJ6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
SfpqQ8VIJ6 Zfp783-201ENSMUST00000095946 670 ntBASIC18.32■□□□□ 0.52
SfpqQ8VIJ6 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms