Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.48■□□□□ 0.55
TraipQ8VIG6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TraipQ8VIG6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TraipQ8VIG6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TraipQ8VIG6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TraipQ8VIG6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TraipQ8VIG6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TraipQ8VIG6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.48■□□□□ 0.55
TraipQ8VIG6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.48■□□□□ 0.55
TraipQ8VIG6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TraipQ8VIG6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TraipQ8VIG6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.48■□□□□ 0.55
TraipQ8VIG6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TraipQ8VIG6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.48■□□□□ 0.55
TraipQ8VIG6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TraipQ8VIG6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TraipQ8VIG6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TraipQ8VIG6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TraipQ8VIG6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TraipQ8VIG6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TraipQ8VIG6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TraipQ8VIG6 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.47■□□□□ 0.55
TraipQ8VIG6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TraipQ8VIG6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TraipQ8VIG6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TraipQ8VIG6 Gm5587-201ENSMUST00000206270 674 ntBASIC18.47■□□□□ 0.55
TraipQ8VIG6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TraipQ8VIG6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TraipQ8VIG6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TraipQ8VIG6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TraipQ8VIG6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TraipQ8VIG6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TraipQ8VIG6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.47■□□□□ 0.55
TraipQ8VIG6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TraipQ8VIG6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TraipQ8VIG6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TraipQ8VIG6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TraipQ8VIG6 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.46■□□□□ 0.55
TraipQ8VIG6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TraipQ8VIG6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TraipQ8VIG6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TraipQ8VIG6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.46■□□□□ 0.55
TraipQ8VIG6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TraipQ8VIG6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.46■□□□□ 0.55
TraipQ8VIG6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.55
TraipQ8VIG6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TraipQ8VIG6 Gm21362-201ENSMUST00000194272 928 ntBASIC18.46■□□□□ 0.55
TraipQ8VIG6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TraipQ8VIG6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TraipQ8VIG6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TraipQ8VIG6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TraipQ8VIG6 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.46■□□□□ 0.55
TraipQ8VIG6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TraipQ8VIG6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TraipQ8VIG6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TraipQ8VIG6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TraipQ8VIG6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.45■□□□□ 0.54
TraipQ8VIG6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TraipQ8VIG6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TraipQ8VIG6 Gm33142-201ENSMUST00000193913 867 ntBASIC18.45■□□□□ 0.54
TraipQ8VIG6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TraipQ8VIG6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TraipQ8VIG6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TraipQ8VIG6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TraipQ8VIG6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TraipQ8VIG6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.45■□□□□ 0.54
TraipQ8VIG6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TraipQ8VIG6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TraipQ8VIG6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
TraipQ8VIG6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TraipQ8VIG6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TraipQ8VIG6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TraipQ8VIG6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TraipQ8VIG6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TraipQ8VIG6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TraipQ8VIG6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TraipQ8VIG6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TraipQ8VIG6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TraipQ8VIG6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TraipQ8VIG6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TraipQ8VIG6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TraipQ8VIG6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.44■□□□□ 0.54
TraipQ8VIG6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TraipQ8VIG6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.44■□□□□ 0.54
TraipQ8VIG6 Gm8969-201ENSMUST00000199694 526 ntBASIC18.44■□□□□ 0.54
TraipQ8VIG6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TraipQ8VIG6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TraipQ8VIG6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TraipQ8VIG6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TraipQ8VIG6 Actl10-202ENSMUST00000226583 1501 ntBASIC18.44■□□□□ 0.54
TraipQ8VIG6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TraipQ8VIG6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TraipQ8VIG6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TraipQ8VIG6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TraipQ8VIG6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TraipQ8VIG6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TraipQ8VIG6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TraipQ8VIG6 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.43■□□□□ 0.54
TraipQ8VIG6 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TraipQ8VIG6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms