Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim60Q8VI40 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim60Q8VI40 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim60Q8VI40 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim60Q8VI40 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim60Q8VI40 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim60Q8VI40 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim60Q8VI40 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trim60Q8VI40 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim60Q8VI40 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim60Q8VI40 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim60Q8VI40 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim60Q8VI40 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Trim60Q8VI40 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trim60Q8VI40 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.99■□□□□ 0.47
Trim60Q8VI40 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.99■□□□□ 0.47
Trim60Q8VI40 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim60Q8VI40 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim60Q8VI40 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim60Q8VI40 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim60Q8VI40 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim60Q8VI40 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trim60Q8VI40 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim60Q8VI40 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trim60Q8VI40 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Trim60Q8VI40 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim60Q8VI40 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim60Q8VI40 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.98■□□□□ 0.47
Trim60Q8VI40 Gm13148-201ENSMUST00000118892 745 ntBASIC17.98■□□□□ 0.47
Trim60Q8VI40 Gm11643-201ENSMUST00000119578 864 ntBASIC17.98■□□□□ 0.47
Trim60Q8VI40 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim60Q8VI40 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim60Q8VI40 Mir6349-201ENSMUST00000184059 97 ntBASIC17.98■□□□□ 0.47
Trim60Q8VI40 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Trim60Q8VI40 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim60Q8VI40 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trim60Q8VI40 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim60Q8VI40 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim60Q8VI40 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim60Q8VI40 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trim60Q8VI40 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim60Q8VI40 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trim60Q8VI40 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim60Q8VI40 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim60Q8VI40 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.97■□□□□ 0.47
Trim60Q8VI40 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim60Q8VI40 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim60Q8VI40 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim60Q8VI40 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim60Q8VI40 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim60Q8VI40 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim60Q8VI40 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim60Q8VI40 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trim60Q8VI40 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim60Q8VI40 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim60Q8VI40 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim60Q8VI40 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.96■□□□□ 0.47
Trim60Q8VI40 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim60Q8VI40 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim60Q8VI40 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.96■□□□□ 0.47
Trim60Q8VI40 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim60Q8VI40 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim60Q8VI40 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim60Q8VI40 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.96■□□□□ 0.47
Trim60Q8VI40 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim60Q8VI40 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim60Q8VI40 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim60Q8VI40 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim60Q8VI40 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim60Q8VI40 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim60Q8VI40 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trim60Q8VI40 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim60Q8VI40 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim60Q8VI40 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim60Q8VI40 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim60Q8VI40 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms