Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps4aQ8VEJ9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vps4aQ8VEJ9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vps4aQ8VEJ9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Vps4aQ8VEJ9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Vps4aQ8VEJ9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vps4aQ8VEJ9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps4aQ8VEJ9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vps4aQ8VEJ9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Vps4aQ8VEJ9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.83■□□□□ 0.28
Vps4aQ8VEJ9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vps4aQ8VEJ9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vps4aQ8VEJ9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.83■□□□□ 0.28
Vps4aQ8VEJ9 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.83■□□□□ 0.28
Vps4aQ8VEJ9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps4aQ8VEJ9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.83■□□□□ 0.28
Vps4aQ8VEJ9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps4aQ8VEJ9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps4aQ8VEJ9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4aQ8VEJ9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Vps4aQ8VEJ9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.82■□□□□ 0.28
Vps4aQ8VEJ9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.82■□□□□ 0.28
Vps4aQ8VEJ9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4aQ8VEJ9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.82■□□□□ 0.28
Vps4aQ8VEJ9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Vps4aQ8VEJ9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4aQ8VEJ9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Vps4aQ8VEJ9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Vps4aQ8VEJ9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.82■□□□□ 0.28
Vps4aQ8VEJ9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4aQ8VEJ9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4aQ8VEJ9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4aQ8VEJ9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4aQ8VEJ9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4aQ8VEJ9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4aQ8VEJ9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Vps4aQ8VEJ9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4aQ8VEJ9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4aQ8VEJ9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4aQ8VEJ9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4aQ8VEJ9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4aQ8VEJ9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.81■□□□□ 0.28
Vps4aQ8VEJ9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.81■□□□□ 0.28
Vps4aQ8VEJ9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4aQ8VEJ9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Vps4aQ8VEJ9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4aQ8VEJ9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Vps4aQ8VEJ9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.81■□□□□ 0.28
Vps4aQ8VEJ9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4aQ8VEJ9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4aQ8VEJ9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.81■□□□□ 0.28
Vps4aQ8VEJ9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4aQ8VEJ9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4aQ8VEJ9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4aQ8VEJ9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Idnk-204ENSMUST00000226010 1898 ntBASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Gm37055-201ENSMUST00000191866 133 ntBASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4aQ8VEJ9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
Vps4aQ8VEJ9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4aQ8VEJ9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.79■□□□□ 0.28
Vps4aQ8VEJ9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4aQ8VEJ9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4aQ8VEJ9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Vps4aQ8VEJ9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4aQ8VEJ9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4aQ8VEJ9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4aQ8VEJ9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Vps4aQ8VEJ9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4aQ8VEJ9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4aQ8VEJ9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4aQ8VEJ9 Gm15378-201ENSMUST00000121894 207 ntBASIC16.79■□□□□ 0.28
Vps4aQ8VEJ9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.79■□□□□ 0.28
Vps4aQ8VEJ9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.79■□□□□ 0.28
Vps4aQ8VEJ9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms