Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rpa1Q8VEE4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rpa1Q8VEE4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rpa1Q8VEE4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rpa1Q8VEE4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rpa1Q8VEE4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Rpa1Q8VEE4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpa1Q8VEE4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rpa1Q8VEE4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpa1Q8VEE4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpa1Q8VEE4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rpa1Q8VEE4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.49■□□□□ 0.39
Rpa1Q8VEE4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
Rpa1Q8VEE4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpa1Q8VEE4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rpa1Q8VEE4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
Rpa1Q8VEE4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpa1Q8VEE4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpa1Q8VEE4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpa1Q8VEE4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpa1Q8VEE4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpa1Q8VEE4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpa1Q8VEE4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rpa1Q8VEE4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rpa1Q8VEE4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpa1Q8VEE4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpa1Q8VEE4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rpa1Q8VEE4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpa1Q8VEE4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Gm15039-201ENSMUST00000118914 875 ntBASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms