Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lmcd1Q8VEE1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lmcd1Q8VEE1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lmcd1Q8VEE1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lmcd1Q8VEE1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lmcd1Q8VEE1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Lmcd1Q8VEE1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lmcd1Q8VEE1 Gm11594-201ENSMUST00000122313 162 ntBASIC18.46■□□□□ 0.55
Lmcd1Q8VEE1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.46■□□□□ 0.55
Lmcd1Q8VEE1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lmcd1Q8VEE1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lmcd1Q8VEE1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lmcd1Q8VEE1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lmcd1Q8VEE1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Lmcd1Q8VEE1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.45■□□□□ 0.54
Lmcd1Q8VEE1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lmcd1Q8VEE1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.45■□□□□ 0.54
Lmcd1Q8VEE1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lmcd1Q8VEE1 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.45■□□□□ 0.54
Lmcd1Q8VEE1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lmcd1Q8VEE1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.45■□□□□ 0.54
Lmcd1Q8VEE1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lmcd1Q8VEE1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Lmcd1Q8VEE1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lmcd1Q8VEE1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Lmcd1Q8VEE1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lmcd1Q8VEE1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lmcd1Q8VEE1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Lmcd1Q8VEE1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lmcd1Q8VEE1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Lmcd1Q8VEE1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Lmcd1Q8VEE1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Lmcd1Q8VEE1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lmcd1Q8VEE1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lmcd1Q8VEE1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lmcd1Q8VEE1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lmcd1Q8VEE1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Lmcd1Q8VEE1 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lmcd1Q8VEE1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lmcd1Q8VEE1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.44■□□□□ 0.54
Lmcd1Q8VEE1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lmcd1Q8VEE1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lmcd1Q8VEE1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Lmcd1Q8VEE1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Lmcd1Q8VEE1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Lmcd1Q8VEE1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Lmcd1Q8VEE1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Lmcd1Q8VEE1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lmcd1Q8VEE1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lmcd1Q8VEE1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Lmcd1Q8VEE1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.43■□□□□ 0.54
Lmcd1Q8VEE1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Lmcd1Q8VEE1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lmcd1Q8VEE1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Lmcd1Q8VEE1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Lmcd1Q8VEE1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lmcd1Q8VEE1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lmcd1Q8VEE1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lmcd1Q8VEE1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.42■□□□□ 0.54
Lmcd1Q8VEE1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Lmcd1Q8VEE1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.42■□□□□ 0.54
Lmcd1Q8VEE1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lmcd1Q8VEE1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lmcd1Q8VEE1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lmcd1Q8VEE1 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.42■□□□□ 0.54
Lmcd1Q8VEE1 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lmcd1Q8VEE1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lmcd1Q8VEE1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lmcd1Q8VEE1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.42■□□□□ 0.54
Lmcd1Q8VEE1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lmcd1Q8VEE1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lmcd1Q8VEE1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lmcd1Q8VEE1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lmcd1Q8VEE1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lmcd1Q8VEE1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lmcd1Q8VEE1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.41■□□□□ 0.54
Lmcd1Q8VEE1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lmcd1Q8VEE1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lmcd1Q8VEE1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lmcd1Q8VEE1 Gm7862-201ENSMUST00000121461 292 ntBASIC18.41■□□□□ 0.54
Lmcd1Q8VEE1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lmcd1Q8VEE1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lmcd1Q8VEE1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.41■□□□□ 0.54
Lmcd1Q8VEE1 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.41■□□□□ 0.54
Lmcd1Q8VEE1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.41■□□□□ 0.54
Lmcd1Q8VEE1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Lmcd1Q8VEE1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.41■□□□□ 0.54
Lmcd1Q8VEE1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lmcd1Q8VEE1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Lmcd1Q8VEE1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Lmcd1Q8VEE1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lmcd1Q8VEE1 Grk6-206ENSMUST00000224995 2971 ntBASIC18.4■□□□□ 0.54
Lmcd1Q8VEE1 Gm12644-201ENSMUST00000119935 606 ntBASIC18.4■□□□□ 0.54
Lmcd1Q8VEE1 Gm6736-201ENSMUST00000166583 948 ntBASIC18.4■□□□□ 0.54
Lmcd1Q8VEE1 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.4■□□□□ 0.54
Lmcd1Q8VEE1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.4■□□□□ 0.54
Lmcd1Q8VEE1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.4■□□□□ 0.54
Lmcd1Q8VEE1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lmcd1Q8VEE1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.4■□□□□ 0.54
Lmcd1Q8VEE1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms