Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ndc1Q8VCB1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ndc1Q8VCB1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ndc1Q8VCB1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ndc1Q8VCB1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ndc1Q8VCB1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Ndc1Q8VCB1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ndc1Q8VCB1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ndc1Q8VCB1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ndc1Q8VCB1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.4■□□□□ 0.22
Ndc1Q8VCB1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ndc1Q8VCB1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ndc1Q8VCB1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ndc1Q8VCB1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ndc1Q8VCB1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ndc1Q8VCB1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ndc1Q8VCB1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 Gm7889-201ENSMUST00000185591 958 ntBASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ndc1Q8VCB1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ndc1Q8VCB1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ndc1Q8VCB1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ndc1Q8VCB1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.38■□□□□ 0.21
Ndc1Q8VCB1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ndc1Q8VCB1 Gm4974-201ENSMUST00000209974 875 ntBASIC16.38■□□□□ 0.21
Ndc1Q8VCB1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ndc1Q8VCB1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ndc1Q8VCB1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ndc1Q8VCB1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ndc1Q8VCB1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ndc1Q8VCB1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
Ndc1Q8VCB1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ndc1Q8VCB1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Ndc1Q8VCB1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.37■□□□□ 0.21
Ndc1Q8VCB1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ndc1Q8VCB1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.37■□□□□ 0.21
Ndc1Q8VCB1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ndc1Q8VCB1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ndc1Q8VCB1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ndc1Q8VCB1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ndc1Q8VCB1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ndc1Q8VCB1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ndc1Q8VCB1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ndc1Q8VCB1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ndc1Q8VCB1 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.37■□□□□ 0.21
Ndc1Q8VCB1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ndc1Q8VCB1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ndc1Q8VCB1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.36■□□□□ 0.21
Ndc1Q8VCB1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ndc1Q8VCB1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ndc1Q8VCB1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ndc1Q8VCB1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ndc1Q8VCB1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ndc1Q8VCB1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ndc1Q8VCB1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ndc1Q8VCB1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ndc1Q8VCB1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ndc1Q8VCB1 Gm10418-201ENSMUST00000100943 576 ntBASIC16.35■□□□□ 0.21
Ndc1Q8VCB1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.35■□□□□ 0.21
Ndc1Q8VCB1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ndc1Q8VCB1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ndc1Q8VCB1 Gm38027-201ENSMUST00000192315 235 ntBASIC16.35■□□□□ 0.21
Ndc1Q8VCB1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.35■□□□□ 0.21
Ndc1Q8VCB1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ndc1Q8VCB1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Ndc1Q8VCB1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.35■□□□□ 0.21
Ndc1Q8VCB1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ndc1Q8VCB1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ndc1Q8VCB1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ndc1Q8VCB1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ndc1Q8VCB1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ndc1Q8VCB1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ndc1Q8VCB1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc1Q8VCB1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc1Q8VCB1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc1Q8VCB1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc1Q8VCB1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc1Q8VCB1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc1Q8VCB1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.34■□□□□ 0.21
Ndc1Q8VCB1 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms