Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rnf8Q8VC56 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf8Q8VC56 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf8Q8VC56 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf8Q8VC56 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf8Q8VC56 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf8Q8VC56 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf8Q8VC56 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.75■□□□□ 0.27
Rnf8Q8VC56 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rnf8Q8VC56 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf8Q8VC56 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf8Q8VC56 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf8Q8VC56 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf8Q8VC56 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.75■□□□□ 0.27
Rnf8Q8VC56 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf8Q8VC56 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf8Q8VC56 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf8Q8VC56 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.73■□□□□ 0.27
Rnf8Q8VC56 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf8Q8VC56 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf8Q8VC56 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf8Q8VC56 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf8Q8VC56 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf8Q8VC56 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rnf8Q8VC56 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Rnf8Q8VC56 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf8Q8VC56 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.73■□□□□ 0.27
Rnf8Q8VC56 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.73■□□□□ 0.27
Rnf8Q8VC56 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf8Q8VC56 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf8Q8VC56 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf8Q8VC56 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf8Q8VC56 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf8Q8VC56 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.71■□□□□ 0.27
Rnf8Q8VC56 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rnf8Q8VC56 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf8Q8VC56 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf8Q8VC56 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf8Q8VC56 Gm2399-201ENSMUST00000104944 225 ntBASIC16.71■□□□□ 0.27
Rnf8Q8VC56 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Rnf8Q8VC56 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Rnf8Q8VC56 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf8Q8VC56 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf8Q8VC56 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rnf8Q8VC56 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf8Q8VC56 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf8Q8VC56 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rnf8Q8VC56 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf8Q8VC56 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf8Q8VC56 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf8Q8VC56 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf8Q8VC56 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
Rnf8Q8VC56 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf8Q8VC56 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf8Q8VC56 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf8Q8VC56 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf8Q8VC56 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf8Q8VC56 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms