Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup35Q8R4R6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.21□□□□□ -0.13
Nup35Q8R4R6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup35Q8R4R6 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Nup35Q8R4R6 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.21□□□□□ -0.14
Nup35Q8R4R6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Nup35Q8R4R6 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup35Q8R4R6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup35Q8R4R6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup35Q8R4R6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nup35Q8R4R6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Nup35Q8R4R6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nup35Q8R4R6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup35Q8R4R6 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nup35Q8R4R6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.2□□□□□ -0.14
Nup35Q8R4R6 Gm13216-201ENSMUST00000117145 591 ntBASIC14.2□□□□□ -0.14
Nup35Q8R4R6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.2□□□□□ -0.14
Nup35Q8R4R6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup35Q8R4R6 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.2□□□□□ -0.14
Nup35Q8R4R6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup35Q8R4R6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup35Q8R4R6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup35Q8R4R6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.2□□□□□ -0.14
Nup35Q8R4R6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup35Q8R4R6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup35Q8R4R6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup35Q8R4R6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nup35Q8R4R6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup35Q8R4R6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup35Q8R4R6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup35Q8R4R6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup35Q8R4R6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup35Q8R4R6 Gm10418-201ENSMUST00000100943 576 ntBASIC14.19□□□□□ -0.14
Nup35Q8R4R6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nup35Q8R4R6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nup35Q8R4R6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup35Q8R4R6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup35Q8R4R6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup35Q8R4R6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup35Q8R4R6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup35Q8R4R6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup35Q8R4R6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.18□□□□□ -0.14
Nup35Q8R4R6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nup35Q8R4R6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup35Q8R4R6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup35Q8R4R6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nup35Q8R4R6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup35Q8R4R6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup35Q8R4R6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.18□□□□□ -0.14
Nup35Q8R4R6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nup35Q8R4R6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup35Q8R4R6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup35Q8R4R6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup35Q8R4R6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup35Q8R4R6 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nup35Q8R4R6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nup35Q8R4R6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup35Q8R4R6 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.18□□□□□ -0.14
Nup35Q8R4R6 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.18□□□□□ -0.14
Nup35Q8R4R6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup35Q8R4R6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup35Q8R4R6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.17□□□□□ -0.14
Nup35Q8R4R6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup35Q8R4R6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Gm38285-201ENSMUST00000192928 922 ntBASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms