Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdt1Q8R4E9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdt1Q8R4E9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdt1Q8R4E9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cdt1Q8R4E9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdt1Q8R4E9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.8■□□□□ 0.28
Cdt1Q8R4E9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdt1Q8R4E9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdt1Q8R4E9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdt1Q8R4E9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdt1Q8R4E9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.8■□□□□ 0.28
Cdt1Q8R4E9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.8■□□□□ 0.28
Cdt1Q8R4E9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdt1Q8R4E9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdt1Q8R4E9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdt1Q8R4E9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdt1Q8R4E9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cdt1Q8R4E9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdt1Q8R4E9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdt1Q8R4E9 Gm13559-201ENSMUST00000120476 863 ntBASIC16.79■□□□□ 0.28
Cdt1Q8R4E9 Gm6659-201ENSMUST00000174752 547 ntBASIC16.79■□□□□ 0.28
Cdt1Q8R4E9 Mir6349-201ENSMUST00000184059 97 ntBASIC16.79■□□□□ 0.28
Cdt1Q8R4E9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.79■□□□□ 0.28
Cdt1Q8R4E9 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.79■□□□□ 0.28
Cdt1Q8R4E9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdt1Q8R4E9 Gm18025-201ENSMUST00000221733 862 ntBASIC16.79■□□□□ 0.28
Cdt1Q8R4E9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdt1Q8R4E9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdt1Q8R4E9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdt1Q8R4E9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdt1Q8R4E9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Gm42545-201ENSMUST00000202755 922 ntBASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdt1Q8R4E9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.77■□□□□ 0.28
Cdt1Q8R4E9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdt1Q8R4E9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdt1Q8R4E9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Cdt1Q8R4E9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdt1Q8R4E9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Cdt1Q8R4E9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdt1Q8R4E9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Cdt1Q8R4E9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdt1Q8R4E9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdt1Q8R4E9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Cdt1Q8R4E9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdt1Q8R4E9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdt1Q8R4E9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdt1Q8R4E9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdt1Q8R4E9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdt1Q8R4E9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Cdt1Q8R4E9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.77■□□□□ 0.27
Cdt1Q8R4E9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Cdt1Q8R4E9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.77■□□□□ 0.27
Cdt1Q8R4E9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdt1Q8R4E9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdt1Q8R4E9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdt1Q8R4E9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.77■□□□□ 0.27
Cdt1Q8R4E9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdt1Q8R4E9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdt1Q8R4E9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdt1Q8R4E9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdt1Q8R4E9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdt1Q8R4E9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdt1Q8R4E9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdt1Q8R4E9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdt1Q8R4E9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdt1Q8R4E9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.76■□□□□ 0.27
Cdt1Q8R4E9 Gm11539-201ENSMUST00000119837 557 ntBASIC16.76■□□□□ 0.27
Cdt1Q8R4E9 Gm13436-201ENSMUST00000120418 567 ntBASIC16.76■□□□□ 0.27
Cdt1Q8R4E9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdt1Q8R4E9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdt1Q8R4E9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdt1Q8R4E9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.76■□□□□ 0.27
Cdt1Q8R4E9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cdt1Q8R4E9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdt1Q8R4E9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdt1Q8R4E9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdt1Q8R4E9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms