Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Cd109Q8R422 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Cd109Q8R422 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Cd109Q8R422 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cd109Q8R422 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Cd109Q8R422 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cd109Q8R422 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Cd109Q8R422 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC24.67■■□□□ 1.54
Cd109Q8R422 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cd109Q8R422 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cd109Q8R422 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Cd109Q8R422 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC24.67■■□□□ 1.54
Cd109Q8R422 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Cd109Q8R422 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC24.67■■□□□ 1.54
Cd109Q8R422 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cd109Q8R422 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cd109Q8R422 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cd109Q8R422 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cd109Q8R422 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Cd109Q8R422 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Cd109Q8R422 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Cd109Q8R422 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Cd109Q8R422 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cd109Q8R422 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cd109Q8R422 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Cd109Q8R422 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
Cd109Q8R422 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cd109Q8R422 Grk6-206ENSMUST00000224995 2971 ntBASIC24.66■■□□□ 1.54
Cd109Q8R422 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cd109Q8R422 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cd109Q8R422 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cd109Q8R422 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cd109Q8R422 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC24.66■■□□□ 1.54
Cd109Q8R422 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Cd109Q8R422 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Cd109Q8R422 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Cd109Q8R422 Mir3081-201ENSMUST00000175305 84 ntBASIC24.65■■□□□ 1.54
Cd109Q8R422 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Cd109Q8R422 Gm27742-201ENSMUST00000184667 60 ntBASIC24.65■■□□□ 1.54
Cd109Q8R422 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Cd109Q8R422 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
Cd109Q8R422 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Cd109Q8R422 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Cd109Q8R422 AC125311.2-201ENSMUST00000227477 1940 ntBASIC24.65■■□□□ 1.54
Cd109Q8R422 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Cd109Q8R422 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Cd109Q8R422 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Cd109Q8R422 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Cd109Q8R422 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC24.64■■□□□ 1.54
Cd109Q8R422 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
Cd109Q8R422 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Cd109Q8R422 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Cd109Q8R422 Gm5828-201ENSMUST00000071842 1860 ntBASIC24.64■■□□□ 1.54
Cd109Q8R422 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Cd109Q8R422 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Cd109Q8R422 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Cd109Q8R422 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Cd109Q8R422 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cd109Q8R422 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC24.63■■□□□ 1.53
Cd109Q8R422 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cd109Q8R422 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cd109Q8R422 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Cd109Q8R422 Umpk-ps-201ENSMUST00000211897 827 ntBASIC24.63■■□□□ 1.53
Cd109Q8R422 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cd109Q8R422 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
Cd109Q8R422 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cd109Q8R422 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cd109Q8R422 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cd109Q8R422 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cd109Q8R422 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cd109Q8R422 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC24.62■■□□□ 1.53
Cd109Q8R422 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Cd109Q8R422 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Cd109Q8R422 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cd109Q8R422 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cd109Q8R422 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cd109Q8R422 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cd109Q8R422 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cd109Q8R422 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cd109Q8R422 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cd109Q8R422 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cd109Q8R422 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cd109Q8R422 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC24.61■■□□□ 1.53
Cd109Q8R422 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cd109Q8R422 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cd109Q8R422 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cd109Q8R422 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cd109Q8R422 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Cd109Q8R422 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cd109Q8R422 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Cd109Q8R422 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Cd109Q8R422 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC24.6■■□□□ 1.53
Cd109Q8R422 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Cd109Q8R422 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cd109Q8R422 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cd109Q8R422 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
Cd109Q8R422 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cd109Q8R422 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Cd109Q8R422 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC24.59■■□□□ 1.53
Cd109Q8R422 AC122351.1-201ENSMUST00000220467 126 ntBASIC24.59■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms