Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup58Q8R332 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup58Q8R332 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup58Q8R332 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup58Q8R332 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup58Q8R332 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nup58Q8R332 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup58Q8R332 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nup58Q8R332 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup58Q8R332 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup58Q8R332 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.61■□□□□ 0.57
Nup58Q8R332 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup58Q8R332 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup58Q8R332 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nup58Q8R332 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Nup58Q8R332 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup58Q8R332 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup58Q8R332 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nup58Q8R332 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup58Q8R332 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.6■□□□□ 0.57
Nup58Q8R332 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup58Q8R332 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup58Q8R332 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nup58Q8R332 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup58Q8R332 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.6■□□□□ 0.57
Nup58Q8R332 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nup58Q8R332 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.6■□□□□ 0.57
Nup58Q8R332 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Nup58Q8R332 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup58Q8R332 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.6■□□□□ 0.57
Nup58Q8R332 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nup58Q8R332 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.6■□□□□ 0.57
Nup58Q8R332 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nup58Q8R332 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup58Q8R332 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Nup58Q8R332 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup58Q8R332 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.6■□□□□ 0.57
Nup58Q8R332 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Nup58Q8R332 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nup58Q8R332 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup58Q8R332 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nup58Q8R332 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup58Q8R332 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup58Q8R332 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup58Q8R332 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.59■□□□□ 0.57
Nup58Q8R332 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nup58Q8R332 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup58Q8R332 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.59■□□□□ 0.57
Nup58Q8R332 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup58Q8R332 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.59■□□□□ 0.57
Nup58Q8R332 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.59■□□□□ 0.57
Nup58Q8R332 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.59■□□□□ 0.57
Nup58Q8R332 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.59■□□□□ 0.57
Nup58Q8R332 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.59■□□□□ 0.57
Nup58Q8R332 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup58Q8R332 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup58Q8R332 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup58Q8R332 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
Nup58Q8R332 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup58Q8R332 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup58Q8R332 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup58Q8R332 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup58Q8R332 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup58Q8R332 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Nup58Q8R332 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup58Q8R332 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup58Q8R332 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Nup58Q8R332 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nup58Q8R332 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Nup58Q8R332 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Nup58Q8R332 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nup58Q8R332 Gm26524-201ENSMUST00000192339 390 ntBASIC18.58■□□□□ 0.56
Nup58Q8R332 Rab3c-203ENSMUST00000224180 967 ntBASIC18.58■□□□□ 0.56
Nup58Q8R332 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.58■□□□□ 0.56
Nup58Q8R332 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nup58Q8R332 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nup58Q8R332 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nup58Q8R332 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Nup58Q8R332 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nup58Q8R332 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.58■□□□□ 0.56
Nup58Q8R332 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nup58Q8R332 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Nup58Q8R332 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nup58Q8R332 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup58Q8R332 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nup58Q8R332 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup58Q8R332 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Nup58Q8R332 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup58Q8R332 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup58Q8R332 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup58Q8R332 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.57■□□□□ 0.56
Nup58Q8R332 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup58Q8R332 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.57■□□□□ 0.56
Nup58Q8R332 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.57■□□□□ 0.56
Nup58Q8R332 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Nup58Q8R332 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Nup58Q8R332 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup58Q8R332 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Nup58Q8R332 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup58Q8R332 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms