Protein–RNA interactions for Protein: Q8R316

Hbp1, HMG box-containing protein 1, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbp1Q8R316 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.18■□□□□ 0.34
Hbp1Q8R316 Gm18032-201ENSMUST00000222541 538 ntBASIC17.18■□□□□ 0.34
Hbp1Q8R316 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hbp1Q8R316 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hbp1Q8R316 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hbp1Q8R316 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hbp1Q8R316 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Hbp1Q8R316 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hbp1Q8R316 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hbp1Q8R316 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hbp1Q8R316 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hbp1Q8R316 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hbp1Q8R316 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hbp1Q8R316 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hbp1Q8R316 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hbp1Q8R316 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hbp1Q8R316 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.17■□□□□ 0.34
Hbp1Q8R316 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Hbp1Q8R316 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hbp1Q8R316 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hbp1Q8R316 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hbp1Q8R316 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hbp1Q8R316 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Hbp1Q8R316 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hbp1Q8R316 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Hbp1Q8R316 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hbp1Q8R316 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hbp1Q8R316 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.17■□□□□ 0.34
Hbp1Q8R316 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.17■□□□□ 0.34
Hbp1Q8R316 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hbp1Q8R316 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hbp1Q8R316 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hbp1Q8R316 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hbp1Q8R316 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Hbp1Q8R316 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hbp1Q8R316 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hbp1Q8R316 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hbp1Q8R316 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hbp1Q8R316 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hbp1Q8R316 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hbp1Q8R316 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Hbp1Q8R316 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Hbp1Q8R316 Gm17661-201ENSMUST00000170317 270 ntBASIC17.16■□□□□ 0.34
Hbp1Q8R316 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.16■□□□□ 0.34
Hbp1Q8R316 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hbp1Q8R316 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.16■□□□□ 0.34
Hbp1Q8R316 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.16■□□□□ 0.34
Hbp1Q8R316 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hbp1Q8R316 Gm18101-201ENSMUST00000215769 548 ntBASIC17.16■□□□□ 0.34
Hbp1Q8R316 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hbp1Q8R316 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hbp1Q8R316 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hbp1Q8R316 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hbp1Q8R316 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hbp1Q8R316 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hbp1Q8R316 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hbp1Q8R316 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hbp1Q8R316 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
Hbp1Q8R316 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hbp1Q8R316 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hbp1Q8R316 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hbp1Q8R316 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hbp1Q8R316 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hbp1Q8R316 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hbp1Q8R316 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hbp1Q8R316 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.15■□□□□ 0.34
Hbp1Q8R316 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.15■□□□□ 0.34
Hbp1Q8R316 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Hbp1Q8R316 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hbp1Q8R316 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hbp1Q8R316 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.15■□□□□ 0.34
Hbp1Q8R316 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Hbp1Q8R316 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hbp1Q8R316 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Hbp1Q8R316 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hbp1Q8R316 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hbp1Q8R316 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hbp1Q8R316 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hbp1Q8R316 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hbp1Q8R316 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Hbp1Q8R316 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Hbp1Q8R316 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hbp1Q8R316 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Hbp1Q8R316 Gm22697-201ENSMUST00000175194 63 ntBASIC17.14■□□□□ 0.33
Hbp1Q8R316 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hbp1Q8R316 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hbp1Q8R316 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hbp1Q8R316 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.14■□□□□ 0.33
Hbp1Q8R316 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hbp1Q8R316 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Hbp1Q8R316 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hbp1Q8R316 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hbp1Q8R316 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hbp1Q8R316 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hbp1Q8R316 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hbp1Q8R316 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hbp1Q8R316 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.13■□□□□ 0.33
Hbp1Q8R316 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hbp1Q8R316 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hbp1Q8R316 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms