Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chmp7Q8R1T1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chmp7Q8R1T1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chmp7Q8R1T1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC22.24■■□□□ 1.15
Chmp7Q8R1T1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chmp7Q8R1T1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Chmp7Q8R1T1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chmp7Q8R1T1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chmp7Q8R1T1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Chmp7Q8R1T1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Chmp7Q8R1T1 Gm43272-201ENSMUST00000200599 1584 ntBASIC22.24■■□□□ 1.15
Chmp7Q8R1T1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Chmp7Q8R1T1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chmp7Q8R1T1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chmp7Q8R1T1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chmp7Q8R1T1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC22.23■■□□□ 1.15
Chmp7Q8R1T1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Chmp7Q8R1T1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Chmp7Q8R1T1 Gm18958-201ENSMUST00000174258 762 ntBASIC22.23■■□□□ 1.15
Chmp7Q8R1T1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Chmp7Q8R1T1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Chmp7Q8R1T1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Chmp7Q8R1T1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Chmp7Q8R1T1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Chmp7Q8R1T1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chmp7Q8R1T1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chmp7Q8R1T1 Gm45141-201ENSMUST00000206502 1888 ntBASIC22.22■■□□□ 1.15
Chmp7Q8R1T1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chmp7Q8R1T1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Chmp7Q8R1T1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Chmp7Q8R1T1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC22.22■■□□□ 1.15
Chmp7Q8R1T1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chmp7Q8R1T1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC22.22■■□□□ 1.15
Chmp7Q8R1T1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC22.22■■□□□ 1.15
Chmp7Q8R1T1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chmp7Q8R1T1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Chmp7Q8R1T1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Chmp7Q8R1T1 Actl10-202ENSMUST00000226583 1501 ntBASIC22.21■■□□□ 1.15
Chmp7Q8R1T1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Chmp7Q8R1T1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chmp7Q8R1T1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chmp7Q8R1T1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC22.21■■□□□ 1.15
Chmp7Q8R1T1 Gm14464-201ENSMUST00000119658 1254 ntBASIC22.21■■□□□ 1.15
Chmp7Q8R1T1 Gm11950-201ENSMUST00000121615 838 ntBASIC22.21■■□□□ 1.15
Chmp7Q8R1T1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Chmp7Q8R1T1 Gm17807-201ENSMUST00000186869 298 ntBASIC22.21■■□□□ 1.15
Chmp7Q8R1T1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chmp7Q8R1T1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chmp7Q8R1T1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chmp7Q8R1T1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Chmp7Q8R1T1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Chmp7Q8R1T1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Chmp7Q8R1T1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.15
Chmp7Q8R1T1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Chmp7Q8R1T1 Gm19721-201ENSMUST00000195284 1764 ntBASIC22.2■■□□□ 1.14
Chmp7Q8R1T1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Chmp7Q8R1T1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Chmp7Q8R1T1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC22.2■■□□□ 1.14
Chmp7Q8R1T1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Chmp7Q8R1T1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC22.2■■□□□ 1.14
Chmp7Q8R1T1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Chmp7Q8R1T1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
Chmp7Q8R1T1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Chmp7Q8R1T1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Chmp7Q8R1T1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC22.19■■□□□ 1.14
Chmp7Q8R1T1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Chmp7Q8R1T1 Gm17971-201ENSMUST00000190239 806 ntBASIC22.19■■□□□ 1.14
Chmp7Q8R1T1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Chmp7Q8R1T1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC22.19■■□□□ 1.14
Chmp7Q8R1T1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Chmp7Q8R1T1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Chmp7Q8R1T1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Chmp7Q8R1T1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC22.19■■□□□ 1.14
Chmp7Q8R1T1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Chmp7Q8R1T1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Chmp7Q8R1T1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Chmp7Q8R1T1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Chmp7Q8R1T1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC22.18■■□□□ 1.14
Chmp7Q8R1T1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Chmp7Q8R1T1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Chmp7Q8R1T1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Chmp7Q8R1T1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Chmp7Q8R1T1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC22.18■■□□□ 1.14
Chmp7Q8R1T1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
Chmp7Q8R1T1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Chmp7Q8R1T1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Chmp7Q8R1T1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Chmp7Q8R1T1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Chmp7Q8R1T1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Chmp7Q8R1T1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Chmp7Q8R1T1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Chmp7Q8R1T1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Chmp7Q8R1T1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Chmp7Q8R1T1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Chmp7Q8R1T1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Chmp7Q8R1T1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Chmp7Q8R1T1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Chmp7Q8R1T1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Chmp7Q8R1T1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Chmp7Q8R1T1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms