Protein–RNA interactions for Protein: Q8R1C9

Apbb3, Amyloid-beta A4 precursor protein-binding family B member 3, mousemouse

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apbb3Q8R1C9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Apbb3Q8R1C9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Apbb3Q8R1C9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Apbb3Q8R1C9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Apbb3Q8R1C9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
Apbb3Q8R1C9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Apbb3Q8R1C9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Gm11950-201ENSMUST00000121615 838 ntBASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Gm26039-201ENSMUST00000158152 144 ntBASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Apbb3Q8R1C9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Apbb3Q8R1C9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Apbb3Q8R1C9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Apbb3Q8R1C9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Apbb3Q8R1C9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Apbb3Q8R1C9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Apbb3Q8R1C9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Apbb3Q8R1C9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Apbb3Q8R1C9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.1■□□□□ 0.33
Apbb3Q8R1C9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Apbb3Q8R1C9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.1■□□□□ 0.33
Apbb3Q8R1C9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Apbb3Q8R1C9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Apbb3Q8R1C9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Apbb3Q8R1C9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Apbb3Q8R1C9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.1■□□□□ 0.33
Apbb3Q8R1C9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Apbb3Q8R1C9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Apbb3Q8R1C9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Apbb3Q8R1C9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Apbb3Q8R1C9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Apbb3Q8R1C9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Apbb3Q8R1C9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Apbb3Q8R1C9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Apbb3Q8R1C9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Apbb3Q8R1C9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.09■□□□□ 0.33
Apbb3Q8R1C9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.09■□□□□ 0.33
Apbb3Q8R1C9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Apbb3Q8R1C9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Apbb3Q8R1C9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Apbb3Q8R1C9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.09■□□□□ 0.33
Apbb3Q8R1C9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Apbb3Q8R1C9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Apbb3Q8R1C9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Apbb3Q8R1C9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Apbb3Q8R1C9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Apbb3Q8R1C9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Apbb3Q8R1C9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Apbb3Q8R1C9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Apbb3Q8R1C9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Apbb3Q8R1C9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Apbb3Q8R1C9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.08■□□□□ 0.33
Apbb3Q8R1C9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Apbb3Q8R1C9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Apbb3Q8R1C9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms