Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx54Q8K4L0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx54Q8K4L0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC22.73■■□□□ 1.23
Ddx54Q8K4L0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx54Q8K4L0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx54Q8K4L0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ddx54Q8K4L0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Ddx54Q8K4L0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ddx54Q8K4L0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ddx54Q8K4L0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC22.72■■□□□ 1.23
Ddx54Q8K4L0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC22.72■■□□□ 1.23
Ddx54Q8K4L0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Ddx54Q8K4L0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ddx54Q8K4L0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ddx54Q8K4L0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ddx54Q8K4L0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Ddx54Q8K4L0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ddx54Q8K4L0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Ddx54Q8K4L0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ddx54Q8K4L0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC22.71■■□□□ 1.23
Ddx54Q8K4L0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Ddx54Q8K4L0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ddx54Q8K4L0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ddx54Q8K4L0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC22.71■■□□□ 1.23
Ddx54Q8K4L0 Cmtm5-203ENSMUST00000227441 610 ntBASIC22.71■■□□□ 1.23
Ddx54Q8K4L0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Ddx54Q8K4L0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ddx54Q8K4L0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ddx54Q8K4L0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ddx54Q8K4L0 Tgds-204ENSMUST00000228543 1594 ntBASIC22.71■■□□□ 1.23
Ddx54Q8K4L0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ddx54Q8K4L0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ddx54Q8K4L0 Gm11336-201ENSMUST00000118168 334 ntBASIC22.7■■□□□ 1.22
Ddx54Q8K4L0 Gm5264-201ENSMUST00000190584 848 ntBASIC22.7■■□□□ 1.22
Ddx54Q8K4L0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ddx54Q8K4L0 Gm43575-201ENSMUST00000196420 516 ntBASIC22.7■■□□□ 1.22
Ddx54Q8K4L0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC22.7■■□□□ 1.22
Ddx54Q8K4L0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC22.7■■□□□ 1.22
Ddx54Q8K4L0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Ddx54Q8K4L0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Ddx54Q8K4L0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Ddx54Q8K4L0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ddx54Q8K4L0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ddx54Q8K4L0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ddx54Q8K4L0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ddx54Q8K4L0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ddx54Q8K4L0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ddx54Q8K4L0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ddx54Q8K4L0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ddx54Q8K4L0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC22.69■■□□□ 1.22
Ddx54Q8K4L0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC22.69■■□□□ 1.22
Ddx54Q8K4L0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC22.69■■□□□ 1.22
Ddx54Q8K4L0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC22.69■■□□□ 1.22
Ddx54Q8K4L0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ddx54Q8K4L0 AC159093.1-201ENSMUST00000227779 380 ntBASIC22.69■■□□□ 1.22
Ddx54Q8K4L0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ddx54Q8K4L0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
Ddx54Q8K4L0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC22.68■■□□□ 1.22
Ddx54Q8K4L0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC22.68■■□□□ 1.22
Ddx54Q8K4L0 Gm6736-201ENSMUST00000166583 948 ntBASIC22.68■■□□□ 1.22
Ddx54Q8K4L0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Ddx54Q8K4L0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC22.68■■□□□ 1.22
Ddx54Q8K4L0 AC125350.1-201ENSMUST00000225115 903 ntBASIC22.68■■□□□ 1.22
Ddx54Q8K4L0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ddx54Q8K4L0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ddx54Q8K4L0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Ddx54Q8K4L0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ddx54Q8K4L0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ddx54Q8K4L0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx54Q8K4L0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Ddx54Q8K4L0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx54Q8K4L0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx54Q8K4L0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC22.67■■□□□ 1.22
Ddx54Q8K4L0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Ddx54Q8K4L0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx54Q8K4L0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC22.67■■□□□ 1.22
Ddx54Q8K4L0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC22.67■■□□□ 1.22
Ddx54Q8K4L0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx54Q8K4L0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx54Q8K4L0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx54Q8K4L0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx54Q8K4L0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx54Q8K4L0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Ddx54Q8K4L0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx54Q8K4L0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx54Q8K4L0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC22.67■■□□□ 1.22
Ddx54Q8K4L0 Gm11779-201ENSMUST00000118541 368 ntBASIC22.66■■□□□ 1.22
Ddx54Q8K4L0 AC160338.1-201ENSMUST00000214232 705 ntBASIC22.66■■□□□ 1.22
Ddx54Q8K4L0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Ddx54Q8K4L0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ddx54Q8K4L0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ddx54Q8K4L0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC22.65■■□□□ 1.22
Ddx54Q8K4L0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx54Q8K4L0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx54Q8K4L0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC22.65■■□□□ 1.22
Ddx54Q8K4L0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Ddx54Q8K4L0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC22.65■■□□□ 1.22
Ddx54Q8K4L0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx54Q8K4L0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx54Q8K4L0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms