Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clrn1Q8K445 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.41■□□□□ 0.22
Clrn1Q8K445 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clrn1Q8K445 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clrn1Q8K445 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clrn1Q8K445 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.41■□□□□ 0.22
Clrn1Q8K445 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn1Q8K445 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn1Q8K445 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn1Q8K445 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Clrn1Q8K445 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn1Q8K445 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn1Q8K445 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn1Q8K445 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn1Q8K445 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn1Q8K445 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Clrn1Q8K445 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn1Q8K445 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn1Q8K445 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn1Q8K445 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn1Q8K445 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn1Q8K445 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn1Q8K445 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn1Q8K445 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn1Q8K445 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn1Q8K445 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.4■□□□□ 0.22
Clrn1Q8K445 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clrn1Q8K445 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.39■□□□□ 0.21
Clrn1Q8K445 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Clrn1Q8K445 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clrn1Q8K445 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clrn1Q8K445 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clrn1Q8K445 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clrn1Q8K445 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clrn1Q8K445 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clrn1Q8K445 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clrn1Q8K445 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.38■□□□□ 0.21
Clrn1Q8K445 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn1Q8K445 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Clrn1Q8K445 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn1Q8K445 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn1Q8K445 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.38■□□□□ 0.21
Clrn1Q8K445 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn1Q8K445 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn1Q8K445 Gm22240-201ENSMUST00000175225 82 ntBASIC16.38■□□□□ 0.21
Clrn1Q8K445 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Clrn1Q8K445 Mir8112-201ENSMUST00000184382 131 ntBASIC16.38■□□□□ 0.21
Clrn1Q8K445 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn1Q8K445 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn1Q8K445 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
Clrn1Q8K445 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn1Q8K445 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn1Q8K445 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn1Q8K445 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn1Q8K445 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Clrn1Q8K445 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.38■□□□□ 0.21
Clrn1Q8K445 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn1Q8K445 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn1Q8K445 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Clrn1Q8K445 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn1Q8K445 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.37■□□□□ 0.21
Clrn1Q8K445 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn1Q8K445 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn1Q8K445 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn1Q8K445 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn1Q8K445 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn1Q8K445 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn1Q8K445 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn1Q8K445 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn1Q8K445 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn1Q8K445 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.37■□□□□ 0.21
Clrn1Q8K445 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn1Q8K445 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn1Q8K445 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn1Q8K445 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.36■□□□□ 0.21
Clrn1Q8K445 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clrn1Q8K445 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clrn1Q8K445 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Clrn1Q8K445 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clrn1Q8K445 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.36■□□□□ 0.21
Clrn1Q8K445 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clrn1Q8K445 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Clrn1Q8K445 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Clrn1Q8K445 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.36■□□□□ 0.21
Clrn1Q8K445 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Clrn1Q8K445 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clrn1Q8K445 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Clrn1Q8K445 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Clrn1Q8K445 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clrn1Q8K445 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn1Q8K445 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn1Q8K445 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn1Q8K445 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn1Q8K445 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Clrn1Q8K445 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn1Q8K445 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn1Q8K445 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn1Q8K445 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Clrn1Q8K445 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn1Q8K445 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms