Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Mrpl47Q8K2Y7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl47Q8K2Y7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.26■□□□□ 0.35
Mrpl47Q8K2Y7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl47Q8K2Y7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Mrpl47Q8K2Y7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.26■□□□□ 0.35
Mrpl47Q8K2Y7 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.26■□□□□ 0.35
Mrpl47Q8K2Y7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl47Q8K2Y7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.26■□□□□ 0.35
Mrpl47Q8K2Y7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl47Q8K2Y7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl47Q8K2Y7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl47Q8K2Y7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.26■□□□□ 0.35
Mrpl47Q8K2Y7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Mrpl47Q8K2Y7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Mrpl47Q8K2Y7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl47Q8K2Y7 Gm10849-201ENSMUST00000100397 618 ntBASIC17.24■□□□□ 0.35
Mrpl47Q8K2Y7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl47Q8K2Y7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl47Q8K2Y7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Mrpl47Q8K2Y7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Mrpl47Q8K2Y7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl47Q8K2Y7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl47Q8K2Y7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl47Q8K2Y7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Mrpl47Q8K2Y7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl47Q8K2Y7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl47Q8K2Y7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Mrpl47Q8K2Y7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl47Q8K2Y7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Mir2861-201ENSMUST00000175539 82 ntBASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl47Q8K2Y7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl47Q8K2Y7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl47Q8K2Y7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Mrpl47Q8K2Y7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.22■□□□□ 0.35
Mrpl47Q8K2Y7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl47Q8K2Y7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl47Q8K2Y7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl47Q8K2Y7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl47Q8K2Y7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Mrpl47Q8K2Y7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl47Q8K2Y7 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.22■□□□□ 0.35
Mrpl47Q8K2Y7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl47Q8K2Y7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl47Q8K2Y7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl47Q8K2Y7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl47Q8K2Y7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl47Q8K2Y7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.22■□□□□ 0.35
Mrpl47Q8K2Y7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl47Q8K2Y7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl47Q8K2Y7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl47Q8K2Y7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms