Protein–RNA interactions for Protein: Q8K299

Scara5, Scavenger receptor class A member 5, mousemouse

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scara5Q8K299 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Scara5Q8K299 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.35■□□□□ 0.37
Scara5Q8K299 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scara5Q8K299 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scara5Q8K299 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scara5Q8K299 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scara5Q8K299 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scara5Q8K299 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Scara5Q8K299 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scara5Q8K299 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scara5Q8K299 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scara5Q8K299 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scara5Q8K299 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scara5Q8K299 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scara5Q8K299 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scara5Q8K299 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scara5Q8K299 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Scara5Q8K299 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scara5Q8K299 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.34■□□□□ 0.37
Scara5Q8K299 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scara5Q8K299 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.34■□□□□ 0.37
Scara5Q8K299 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scara5Q8K299 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scara5Q8K299 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scara5Q8K299 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scara5Q8K299 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scara5Q8K299 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Scara5Q8K299 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Scara5Q8K299 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scara5Q8K299 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scara5Q8K299 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.33■□□□□ 0.37
Scara5Q8K299 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scara5Q8K299 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scara5Q8K299 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.33■□□□□ 0.36
Scara5Q8K299 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scara5Q8K299 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scara5Q8K299 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.33■□□□□ 0.36
Scara5Q8K299 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scara5Q8K299 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Scara5Q8K299 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scara5Q8K299 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scara5Q8K299 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scara5Q8K299 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scara5Q8K299 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scara5Q8K299 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Scara5Q8K299 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scara5Q8K299 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scara5Q8K299 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scara5Q8K299 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Scara5Q8K299 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scara5Q8K299 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Scara5Q8K299 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.32■□□□□ 0.36
Scara5Q8K299 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scara5Q8K299 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scara5Q8K299 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scara5Q8K299 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scara5Q8K299 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scara5Q8K299 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Scara5Q8K299 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Scara5Q8K299 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scara5Q8K299 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scara5Q8K299 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scara5Q8K299 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scara5Q8K299 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scara5Q8K299 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scara5Q8K299 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Scara5Q8K299 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Scara5Q8K299 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scara5Q8K299 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scara5Q8K299 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scara5Q8K299 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scara5Q8K299 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
Scara5Q8K299 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.31■□□□□ 0.36
Scara5Q8K299 Mir3081-201ENSMUST00000175305 84 ntBASIC17.31■□□□□ 0.36
Scara5Q8K299 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Scara5Q8K299 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scara5Q8K299 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scara5Q8K299 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scara5Q8K299 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Scara5Q8K299 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.31■□□□□ 0.36
Scara5Q8K299 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scara5Q8K299 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scara5Q8K299 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scara5Q8K299 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.3■□□□□ 0.36
Scara5Q8K299 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Scara5Q8K299 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scara5Q8K299 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scara5Q8K299 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scara5Q8K299 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scara5Q8K299 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scara5Q8K299 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scara5Q8K299 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scara5Q8K299 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Scara5Q8K299 Gm11950-201ENSMUST00000121615 838 ntBASIC17.3■□□□□ 0.36
Scara5Q8K299 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scara5Q8K299 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scara5Q8K299 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.3■□□□□ 0.36
Scara5Q8K299 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.3■□□□□ 0.36
Scara5Q8K299 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.3■□□□□ 0.36
Scara5Q8K299 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms