Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn1Q8K0T0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rtn1Q8K0T0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rtn1Q8K0T0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn1Q8K0T0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn1Q8K0T0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn1Q8K0T0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rtn1Q8K0T0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn1Q8K0T0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn1Q8K0T0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn1Q8K0T0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn1Q8K0T0 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.03■□□□□ 0.8
Rtn1Q8K0T0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn1Q8K0T0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.03■□□□□ 0.8
Rtn1Q8K0T0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn1Q8K0T0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Rtn1Q8K0T0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.03■□□□□ 0.8
Rtn1Q8K0T0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn1Q8K0T0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn1Q8K0T0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn1Q8K0T0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn1Q8K0T0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rtn1Q8K0T0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rtn1Q8K0T0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn1Q8K0T0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn1Q8K0T0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn1Q8K0T0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn1Q8K0T0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn1Q8K0T0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn1Q8K0T0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn1Q8K0T0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn1Q8K0T0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn1Q8K0T0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn1Q8K0T0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtn1Q8K0T0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Rtn1Q8K0T0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Rtn1Q8K0T0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rtn1Q8K0T0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.02■□□□□ 0.79
Rtn1Q8K0T0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Rtn1Q8K0T0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Timm23-208ENSMUST00000226683 750 ntBASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Rtn1Q8K0T0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn1Q8K0T0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn1Q8K0T0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rtn1Q8K0T0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20■□□□□ 0.79
Rtn1Q8K0T0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20■□□□□ 0.79
Rtn1Q8K0T0 Mir5122-201ENSMUST00000175004 89 ntBASIC20■□□□□ 0.79
Rtn1Q8K0T0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20■□□□□ 0.79
Rtn1Q8K0T0 Otx2os1-204ENSMUST00000227221 751 ntBASIC20■□□□□ 0.79
Rtn1Q8K0T0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn1Q8K0T0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn1Q8K0T0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rtn1Q8K0T0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtn1Q8K0T0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rtn1Q8K0T0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
Rtn1Q8K0T0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.99■□□□□ 0.79
Rtn1Q8K0T0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn1Q8K0T0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn1Q8K0T0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Rtn1Q8K0T0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn1Q8K0T0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn1Q8K0T0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.99■□□□□ 0.79
Rtn1Q8K0T0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn1Q8K0T0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn1Q8K0T0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn1Q8K0T0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtn1Q8K0T0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn1Q8K0T0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn1Q8K0T0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.98■□□□□ 0.79
Rtn1Q8K0T0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn1Q8K0T0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn1Q8K0T0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Rtn1Q8K0T0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn1Q8K0T0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtn1Q8K0T0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms