Protein–RNA interactions for Protein: Q8K0H1

Slc47a1, Multidrug and toxin extrusion protein 1, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc47a1Q8K0H1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc47a1Q8K0H1 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.15■□□□□ 0.34
Slc47a1Q8K0H1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.15■□□□□ 0.34
Slc47a1Q8K0H1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc47a1Q8K0H1 Gm8520-201ENSMUST00000186517 868 ntBASIC17.15■□□□□ 0.34
Slc47a1Q8K0H1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.15■□□□□ 0.34
Slc47a1Q8K0H1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc47a1Q8K0H1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Slc47a1Q8K0H1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc47a1Q8K0H1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc47a1Q8K0H1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc47a1Q8K0H1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc47a1Q8K0H1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc47a1Q8K0H1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc47a1Q8K0H1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Slc47a1Q8K0H1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Slc47a1Q8K0H1 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc47a1Q8K0H1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.13■□□□□ 0.33
Slc47a1Q8K0H1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc47a1Q8K0H1 Gm12527-201ENSMUST00000117967 564 ntBASIC17.13■□□□□ 0.33
Slc47a1Q8K0H1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Slc47a1Q8K0H1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc47a1Q8K0H1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Slc47a1Q8K0H1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc47a1Q8K0H1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc47a1Q8K0H1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc47a1Q8K0H1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc47a1Q8K0H1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc47a1Q8K0H1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc47a1Q8K0H1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Slc47a1Q8K0H1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc47a1Q8K0H1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc47a1Q8K0H1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc47a1Q8K0H1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Slc47a1Q8K0H1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.12■□□□□ 0.33
Slc47a1Q8K0H1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc47a1Q8K0H1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc47a1Q8K0H1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc47a1Q8K0H1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc47a1Q8K0H1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Slc47a1Q8K0H1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc47a1Q8K0H1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Slc47a1Q8K0H1 Flg-201ENSMUST00000050758 1488 ntBASIC17.12■□□□□ 0.33
Slc47a1Q8K0H1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Gm2559-201ENSMUST00000201323 363 ntBASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc47a1Q8K0H1 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.1■□□□□ 0.33
Slc47a1Q8K0H1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc47a1Q8K0H1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.1■□□□□ 0.33
Slc47a1Q8K0H1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc47a1Q8K0H1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms