Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim61Q8JZK6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim61Q8JZK6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim61Q8JZK6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim61Q8JZK6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim61Q8JZK6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
Trim61Q8JZK6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trim61Q8JZK6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim61Q8JZK6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim61Q8JZK6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim61Q8JZK6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim61Q8JZK6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim61Q8JZK6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim61Q8JZK6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim61Q8JZK6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.22■□□□□ 0.51
Trim61Q8JZK6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trim61Q8JZK6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim61Q8JZK6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim61Q8JZK6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim61Q8JZK6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim61Q8JZK6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim61Q8JZK6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim61Q8JZK6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim61Q8JZK6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim61Q8JZK6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim61Q8JZK6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trim61Q8JZK6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim61Q8JZK6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim61Q8JZK6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim61Q8JZK6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trim61Q8JZK6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim61Q8JZK6 Gm9731-201ENSMUST00000209480 747 ntBASIC18.21■□□□□ 0.51
Trim61Q8JZK6 Gm7370-201ENSMUST00000219471 767 ntBASIC18.21■□□□□ 0.51
Trim61Q8JZK6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Trim61Q8JZK6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim61Q8JZK6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim61Q8JZK6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Trim61Q8JZK6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim61Q8JZK6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim61Q8JZK6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim61Q8JZK6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trim61Q8JZK6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Trim61Q8JZK6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim61Q8JZK6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim61Q8JZK6 Gm14859-201ENSMUST00000117752 357 ntBASIC18.2■□□□□ 0.5
Trim61Q8JZK6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.2■□□□□ 0.5
Trim61Q8JZK6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim61Q8JZK6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.2■□□□□ 0.5
Trim61Q8JZK6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim61Q8JZK6 Gm37025-201ENSMUST00000195159 829 ntBASIC18.2■□□□□ 0.5
Trim61Q8JZK6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim61Q8JZK6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim61Q8JZK6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim61Q8JZK6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim61Q8JZK6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim61Q8JZK6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim61Q8JZK6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim61Q8JZK6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Il3ra-202ENSMUST00000223589 738 ntBASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim61Q8JZK6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trim61Q8JZK6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim61Q8JZK6 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.18■□□□□ 0.5
Trim61Q8JZK6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim61Q8JZK6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim61Q8JZK6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim61Q8JZK6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.18■□□□□ 0.5
Trim61Q8JZK6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim61Q8JZK6 Gm27389-201ENSMUST00000183622 195 ntBASIC18.18■□□□□ 0.5
Trim61Q8JZK6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.18■□□□□ 0.5
Trim61Q8JZK6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim61Q8JZK6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim61Q8JZK6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms