Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rbm28Q8CGC6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rbm28Q8CGC6 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.54■□□□□ 0.88
Rbm28Q8CGC6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rbm28Q8CGC6 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.54■□□□□ 0.88
Rbm28Q8CGC6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rbm28Q8CGC6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rbm28Q8CGC6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Rbm28Q8CGC6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Rbm28Q8CGC6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rbm28Q8CGC6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.52■□□□□ 0.88
Rbm28Q8CGC6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rbm28Q8CGC6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Rbm28Q8CGC6 Gm18959-201ENSMUST00000208954 655 ntBASIC20.52■□□□□ 0.88
Rbm28Q8CGC6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rbm28Q8CGC6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rbm28Q8CGC6 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.52■□□□□ 0.88
Rbm28Q8CGC6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rbm28Q8CGC6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rbm28Q8CGC6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rbm28Q8CGC6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rbm28Q8CGC6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Rbm28Q8CGC6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rbm28Q8CGC6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rbm28Q8CGC6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rbm28Q8CGC6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rbm28Q8CGC6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rbm28Q8CGC6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.51■□□□□ 0.87
Rbm28Q8CGC6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.51■□□□□ 0.87
Rbm28Q8CGC6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rbm28Q8CGC6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rbm28Q8CGC6 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.51■□□□□ 0.87
Rbm28Q8CGC6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rbm28Q8CGC6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.51■□□□□ 0.87
Rbm28Q8CGC6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rbm28Q8CGC6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rbm28Q8CGC6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rbm28Q8CGC6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rbm28Q8CGC6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rbm28Q8CGC6 Gm13401-201ENSMUST00000117074 291 ntBASIC20.5■□□□□ 0.87
Rbm28Q8CGC6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rbm28Q8CGC6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rbm28Q8CGC6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rbm28Q8CGC6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rbm28Q8CGC6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.5■□□□□ 0.87
Rbm28Q8CGC6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rbm28Q8CGC6 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rbm28Q8CGC6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rbm28Q8CGC6 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.5■□□□□ 0.87
Rbm28Q8CGC6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rbm28Q8CGC6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rbm28Q8CGC6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.49■□□□□ 0.87
Rbm28Q8CGC6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rbm28Q8CGC6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rbm28Q8CGC6 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.49■□□□□ 0.87
Rbm28Q8CGC6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rbm28Q8CGC6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rbm28Q8CGC6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Rbm28Q8CGC6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rbm28Q8CGC6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rbm28Q8CGC6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rbm28Q8CGC6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rbm28Q8CGC6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Rbm28Q8CGC6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rbm28Q8CGC6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Rbm28Q8CGC6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rbm28Q8CGC6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rbm28Q8CGC6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rbm28Q8CGC6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rbm28Q8CGC6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Rbm28Q8CGC6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rbm28Q8CGC6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Rbm28Q8CGC6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rbm28Q8CGC6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Rbm28Q8CGC6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rbm28Q8CGC6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms