Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Smc4Q8CG47 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smc4Q8CG47 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Smc4Q8CG47 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smc4Q8CG47 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Smc4Q8CG47 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smc4Q8CG47 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smc4Q8CG47 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smc4Q8CG47 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Smc4Q8CG47 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smc4Q8CG47 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Smc4Q8CG47 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Smc4Q8CG47 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smc4Q8CG47 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smc4Q8CG47 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smc4Q8CG47 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.42■■□□□ 1.02
Smc4Q8CG47 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Smc4Q8CG47 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smc4Q8CG47 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smc4Q8CG47 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smc4Q8CG47 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Smc4Q8CG47 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Smc4Q8CG47 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smc4Q8CG47 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smc4Q8CG47 Gm10013-201ENSMUST00000106074 672 ntBASIC21.41■■□□□ 1.02
Smc4Q8CG47 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Smc4Q8CG47 Gm4217-201ENSMUST00000182243 1002 ntBASIC21.41■■□□□ 1.02
Smc4Q8CG47 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Smc4Q8CG47 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21.41■■□□□ 1.02
Smc4Q8CG47 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smc4Q8CG47 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smc4Q8CG47 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Smc4Q8CG47 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Smc4Q8CG47 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smc4Q8CG47 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC21.4■■□□□ 1.02
Smc4Q8CG47 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Smc4Q8CG47 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC21.4■■□□□ 1.02
Smc4Q8CG47 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Smc4Q8CG47 AC134329.2-201ENSMUST00000217897 428 ntBASIC21.4■■□□□ 1.02
Smc4Q8CG47 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smc4Q8CG47 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.4■■□□□ 1.02
Smc4Q8CG47 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smc4Q8CG47 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Smc4Q8CG47 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smc4Q8CG47 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Smc4Q8CG47 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Smc4Q8CG47 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Smc4Q8CG47 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Smc4Q8CG47 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Smc4Q8CG47 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC21.39■■□□□ 1.01
Smc4Q8CG47 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Smc4Q8CG47 Gm18032-201ENSMUST00000222541 538 ntBASIC21.39■■□□□ 1.01
Smc4Q8CG47 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smc4Q8CG47 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smc4Q8CG47 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smc4Q8CG47 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smc4Q8CG47 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smc4Q8CG47 Gm19721-201ENSMUST00000195284 1764 ntBASIC21.38■■□□□ 1.01
Smc4Q8CG47 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
Smc4Q8CG47 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Smc4Q8CG47 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.38■■□□□ 1.01
Smc4Q8CG47 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smc4Q8CG47 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smc4Q8CG47 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Smc4Q8CG47 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smc4Q8CG47 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Smc4Q8CG47 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smc4Q8CG47 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smc4Q8CG47 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Smc4Q8CG47 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
Smc4Q8CG47 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Smc4Q8CG47 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Smc4Q8CG47 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smc4Q8CG47 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
Smc4Q8CG47 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC21.37■■□□□ 1.01
Smc4Q8CG47 Gm6659-201ENSMUST00000174752 547 ntBASIC21.37■■□□□ 1.01
Smc4Q8CG47 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Smc4Q8CG47 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC21.37■■□□□ 1.01
Smc4Q8CG47 Gm18101-201ENSMUST00000215769 548 ntBASIC21.37■■□□□ 1.01
Smc4Q8CG47 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Smc4Q8CG47 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smc4Q8CG47 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smc4Q8CG47 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smc4Q8CG47 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smc4Q8CG47 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smc4Q8CG47 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smc4Q8CG47 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.37■■□□□ 1.01
Smc4Q8CG47 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smc4Q8CG47 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smc4Q8CG47 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Smc4Q8CG47 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC21.36■■□□□ 1.01
Smc4Q8CG47 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smc4Q8CG47 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smc4Q8CG47 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smc4Q8CG47 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.36■■□□□ 1.01
Smc4Q8CG47 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smc4Q8CG47 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Smc4Q8CG47 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smc4Q8CG47 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smc4Q8CG47 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms